Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6932g00002 GTTATGCAAGTTGAACCCTTGATATCAAGAATTCACACTTCAGGGCTCAATATTTTCCAGCAGCTGAAGGCTTCTCAGCATCTCCCTGATGAATTAAGTTCTGAACATTTACAGCACTGTTCACAAAAACTTAAGCTTTTGGGACATGAAGAAACCTCACCAGTCATTAAGGAAGCTATTACAAAACAACTGGAAAATGTAGGACCCAGTTCAGAAGTCCTGGCAAAAATTGCTGATAGCCTGGGCCTAAGGTCTAATCAGGAGGTTCTTATTGAGGCCGTGGCCCTTGAAAGGTTGAAGGAGAATGCTGAGCAAAGTGAAAAGACTGCAGAAGCTGAATACATTGATCAAATGATTGCTGTTGTAACACGTACGCACGACCATCTTGTTATGCTTAAGCAAGCCCAGAGTAGCAGCCCAGTTCCAATACCTGCTGATTTTTGTTGTCCTCTTTCTTTGGAGTTGATGACCGATCCTGTGATTGTGGCATCAGGGCAAACATATGAGCGAGCTTTCATCAAGAACTGGATTGATCTTGGGCTTACTGTTTGTCCAAAGACACGTCAGACTCTTGCTCATACCAACCTAATACCTAATTATACTGTAAAAGCACTAATTGCAAATTGGTGTGAAGTGAACAATGTTCAACTGGTTGATCCCACAAAATCGACAAATTTAAATCAACCATCCGTCCTTCATGGGTATTTGGAATCTGGTACAACCAGGGAATCACCTGTTTTTGCTCATTCCAGGAGCAACCAGCCATCCTCACCTGAGTCAGCACGTTCTCATTCTTTTAGTTCACCAGGTAATAACATAACTTCTGGTGGAATTCAGCGAGAGGGAACATCACCTTTGCATCCCCGTTCAACTTCAGAAGGCTCCTTAAGTGGTATGGTTAATGGGCAATGTATGGATCTTGGAAGAATATCTCTTGCAGGTTTGGATGACAGGTCTGCTAGTTCCGATGAAAGCAGTGTGGATTCAGTTAGCCAACCATCAATGTCACCATCTAGAAGGGAATCTTCCAGTGCCTTTAGCTCTGAACAATCTCAAACCCATATTAGAGCTGTCTCTGATTCCAGTGCCCTTTCTACTGCAAATTTTCCTCAAGAAACACAAGGCGATGACAACAGTGCTCCTCAGCTGTCAACTAGTCCAGGCCACAGTAGAGATGCTTCTGGTGAATTAAATCCAGGGCCAGAAACTGCTGGTACTACTGCCATGCCGTCGATGCATAGAGAGCCCGAGTTCCCACCCCGAATATTGGAGTCAAGGTCTCGAAGTCATGCCATGTGGAGGCGGCCATCAGAGAGGCTTGTTCCTAGAATAGTATCTTCTCCTGCTGTTGAAAGAAGAGCTGATCTTTCTGGTATTGAAACCCAGGTTCGGAATTTGGTTGAGGGCTTGAGGAGCTCTGATCTTGATACTCAGAGAGAGGCAACAGCAGAGCTTCGCCTTCTTGCTAAGCACAATATGGATAATCGAATTGCGATTGCAAACTGTGGAGCCATTAACATATTAGTTGATTTACTTCGATCAACTGATACAACTATCCAAGAAAATGCTGTTACTGCACTTCTAAACTTATCAATCAATGATAACAACAAAACTGCAATTGCAAATGCTGGTGCAATTGAACCTCTGATTCATGTGCTTGAGACTGGGAGCCCAGAGGCCAAGGAGAATTCAGCTGCCACTCTTTTCAGCTTATCAGTGATTGAGGAAAACAAGATTTTCATAGGGAGGTCCGGGGCAATTGGACCACTGGTAGATTTATTGGGGAATGGAACGCCTAGAGGAAAGAAAGATGCTGCCACTGCTTTGTTTAATTTGTCAATATTTCATGAAAACAAGGGTAGGATTGTGCAAGCTGGTGCTGTGAGACACCTTGTGGAGTTAATGGACCCAGCAGCTGGAATGGTTGACAAGGCAGTGGCTGTCTTAGCAAATCTTGCCACAATTCCAGAAGGAAGAAATGCAATTGGTCAGGAAGGTGGGATTCCTGTTCTGGTTGAGGTGGTTGAGTTGGGTTCTGCGAGAGGAAAGGAGAATGCAGCAGCAGCTCTTCTGCATCTTTGCTCGCAGAGTCCCAGATTTTTAAGCATGGTGCTCCAACAAGGAGCTGTCCCTCCATTAGTAGCGTTATCACAGTCAGGCACCCCAAGGGCCAAAGAAAAGGCCCAGGGTCTCCTCAATCAATTTAGAAGTCAAAGACATGGGAATGGTGGGAGGGGCTGA 2241 0.448 VMQVEPLISRIHTSGLNIFQQLKASQHLPDELSSEHLQHCSQKLKLLGHEETSPVIKEAITKQLENVGPSSEVLAKIADSLGLRSNQEVLIEAVALERLKENAEQSEKTAEAEYIDQMIAVVTRTHDHLVMLKQAQSSSPVPIPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLAHTNLIPNYTVKALIANWCEVNNVQLVDPTKSTNLNQPSVLHGYLESGTTRESPVFAHSRSNQPSSPESARSHSFSSPGNNITSGGIQREGTSPLHPRSTSEGSLSGMVNGQCMDLGRISLAGLDDRSASSDESSVDSVSQPSMSPSRRESSSAFSSEQSQTHIRAVSDSSALSTANFPQETQGDDNSAPQLSTSPGHSRDASGELNPGPETAGTTAMPSMHREPEFPPRILESRSRSHAMWRRPSERLVPRIVSSPAVERRADLSGIETQVRNLVEGLRSSDLDTQREATAELRLLAKHNMDNRIAIANCGAINILVDLLRSTDTTIQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLETGSPEAKENSAATLFSLSVIEENKIFIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIFHENKGRIVQAGAVRHLVELMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPVLVEVVELGSARGKENAAAALLHLCSQSPRFLSMVLQQGAVPPLVALSQSGTPRAKEKAQGLLNQFRSQRHGNGGRG 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6932g00002 746 Gene3D - 443 740 IPR011989 -
Mupr6932g00002 746 MobiDBLite consensus disorder prediction 725 746 - -
Mupr6932g00002 746 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 626 667 IPR000225 GO:0005515
Mupr6932g00002 746 SUPERFAMILY ARM repeat 463 735 IPR016024 -
Mupr6932g00002 746 SUPERFAMILY RING/U-box 133 220 - -
Mupr6932g00002 746 FunFam RING-type E3 ubiquitin transferase 446 741 - -
Mupr6932g00002 746 CDD RING-Ubox_PUB 144 196 IPR045210 -
Mupr6932g00002 746 MobiDBLite consensus disorder prediction 318 392 - -
Mupr6932g00002 746 SMART arm_5 697 737 IPR000225 GO:0005515
Mupr6932g00002 746 SMART arm_5 492 532 IPR000225 GO:0005515
Mupr6932g00002 746 SMART arm_5 615 654 IPR000225 GO:0005515
Mupr6932g00002 746 SMART arm_5 655 695 IPR000225 GO:0005515
Mupr6932g00002 746 SMART arm_5 533 573 IPR000225 GO:0005515
Mupr6932g00002 746 SMART arm_5 574 614 IPR000225 GO:0005515
Mupr6932g00002 746 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 222 IPR013083 -
Mupr6932g00002 746 Pfam U-box domain 143 213 IPR003613 GO:0004842|GO:0016567
Mupr6932g00002 746 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 503 545 IPR000225 GO:0005515
Mupr6932g00002 746 MobiDBLite consensus disorder prediction 317 417 - -
Mupr6932g00002 746 MobiDBLite consensus disorder prediction 245 299 - -
Mupr6932g00002 746 FunFam RING-type E3 ubiquitin transferase 142 217 - -
Mupr6932g00002 746 ProSiteProfiles U-box domain profile. 142 216 IPR003613 GO:0004842|GO:0016567
Mupr6932g00002 746 Pfam Armadillo/beta-catenin-like repeat 576 613 IPR000225 GO:0005515
Mupr6932g00002 746 Pfam Armadillo/beta-catenin-like repeat 494 531 IPR000225 GO:0005515
Mupr6932g00002 746 Pfam Armadillo/beta-catenin-like repeat 533 572 IPR000225 GO:0005515
Mupr6932g00002 746 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 585 627 IPR000225 GO:0005515
Mupr6932g00002 746 SMART Ubox_2 146 209 IPR003613 GO:0004842|GO:0016567
Mupr6932g00002 746 Coils Coil 86 116 - -
Mupr6932g00002 746 PANTHER U BOX DOMAIN-CONTAINING 5 734 - -
Mupr6932g00002 746 MobiDBLite consensus disorder prediction 245 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6932g00002 Mupr-Chr6932 3737 6173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6932g00002 103 746 U-box Gene Family AT2G23140 64.031 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6932g00002 - - gmx:100811250 1247.65