Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6913g00004 ATGCACAATGGGAGAGATAGGGAGATGGTGAGGGAGATGAGTGTGATGCTTTTGGGTGGAGGAGAGATTGCACATCCTCCCTCAGAAAACCTAGCACAAGGTGACACAGACACTCACTACTCTCAAACTGTGTCCAGCATCCTTCAAAAGAACTCTGGGTGGTGGCCGGACTCACCCTCCGTCAGCCACCTCACCGATTCCTTCCAATCAGCTTTCAACAAGTGGAGTTCCGGCGCGGAAGAATACCACCGCCGCTTTCAGGTGACGGTGGCCGACGTTACCTCCCAATGGCTCCTCAAGTACATTTTGTTTAGCGTCCCTTACTTGCACGCCAACCGACATAAGGGCAAAGGCGTCCCGCCATACGAGACTAGTCACGTGATGGCGGAACGCCGCCGAAGAGAGAAGTTGAACGAGAGATTTCTCGTTCTGAGGTCAATGGTGCCTTTTGTAACCAGAATGGACAAAGCCTCCATTCTGGGAGACACCATCGAGTACATTAAACAACTGCGTGAGAAGATTGAGAGTCTCGAGGCGTGTGAGCACCACGAGCGGAAGAGGAGGGTGAGGGAGGTGGAGGTTTCGATAATAGAGAGTGAGGCACTATTGGAGGTGGAATGTGTGCATAGGGAAGGGTTGTTGCTGGATGTGATGACAATGTTGAGGGATATAGGGGTGGAAGTGATAATGGTGCAGTCTTGGGTTAAGGATGATGGAGTGTTTGTGGCGGAGATGAGGGCCAAGGTGAAGGAAAACCCTAACGGGAATAAGGCTAGCATTGTGGAAGTGAAAAAAGCCCTAAACCGGATTATACCCCATCATGAGCCATACACACTTGCTTCTAATGATCATTTTTAA 858 0.5047 MHNGRDREMVREMSVMLLGGGEIAHPPSENLAQGDTDTHYSQTVSSILQKNSGWWPDSPSVSHLTDSFQSAFNKWSSGAEEYHRRFQVTVADVTSQWLLKYILFSVPYLHANRHKGKGVPPYETSHVMAERRRREKLNERFLVLRSMVPFVTRMDKASILGDTIEYIKQLREKIESLEACEHHERKRRVREVEVSIIESEALLEVECVHREGLLLDVMTMLRDIGVEVIMVQSWVKDDGVFVAEMRAKVKENPNGNKASIVEVKKALNRIIPHHEPYTLASNDHF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6913g00004 285 PANTHER TRANSCRIPTION FACTOR TT8 30 272 - -
Mupr6913g00004 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 183 IPR036638 GO:0046983
Mupr6913g00004 285 Gene3D - 121 183 IPR036638 GO:0046983
Mupr6913g00004 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 121 170 IPR011598 GO:0046983
Mupr6913g00004 285 SMART finulus 127 176 IPR011598 GO:0046983
Mupr6913g00004 285 Pfam Helix-loop-helix DNA-binding domain 124 171 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6913g00004 Mupr-Chr6913 13743 16679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6913g00004 39 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 47.541 1.83e-60 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6913g00004 HLH 8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6913g00004 - - pvu:PHAVU_001G1503000 428.328