Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6876g00002 ATGTGGACTAAGTTAGCCCAGTCCATTTATAATGAACCAGTGAAGGACTTTGGGTTGGGTTGCTCTGTTTCTAAGCCAAATATTTCACTTGTCTCACCATCAGTCTGTTATGACTTTATGTGTGAAGAGATGGAAAGCTGCACCAGCAACAGCAGTGACAACAACAATCACTGGAGAGCCGAGGATGCAATCGGAGGCAATGCTGAAGCTCTTCAGGCCCTTAGAGAACTCATCATATTCCCTCTTCACTTCTCTCACCAAGCACAGAAGCTTGGCCTTAAGTGGCCAAGAGGATTGCTGCTGTACGGTCCACCAGGCACTGGAAAGACAAGTTTGGTACGAGCAGTTGTTCAGGAGTGCGGGGCACATTTGACAATTATCAGTCCACACTCTGTTCATAGAGCACATGCTGGTGAAAGTGAGAGAATTCTCCGTGACGCTTTTTCAGAGGCATCATCTCATGTAGCCTTGGGCAAGACATCGGTTATCTTTATAGATGAAATAGATGCACTCTGTGCTCGCCGAGATTCCAAAAGGGAGCAAGATGTCAGAGTTGCCTCCCAACTCTTCACTCTGATGGACTCAAATAAACCAACCATTTCTACACCAGGTGTAGTTGTGGTTGCATCAACGAACAGAGTGGATGCAATTGACCCTGCTCTAAGAAGGTCTGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAAATGAAGAGGAGCGCTTTCAAATTCTGAAGTTGTATACAAAGACAATTCCCTTGGATCCCAGTCTTGACATAAAGTCCATTGCTGCATCGTGCAATGGATATGTTGGAGCTGATTTGGAGGCTTTGTGTCGTGAAGCTACAATGTTTGCAATTAAAAGATCCTCAAATACAAAAGATGCTAGTAATTTTATTCTAACAATGGAAGATTGGAAGAATGCAAGGTCTGTTGTTGGTCCAAGTATAACAAGAGGTGTTACTGTGGAAATTCCCAAAGTGACTTGGGAAGACATTGGTGGATTAAAAGAATTGAAGAAAAAACTCCAGCAAGCTGTTGAGTGGCCTATTAAGAATTCTGCTGCATTTTCAAGATTGGGAATATCCCCTGTACGGGGAATTCTTCTCCATGGGCCTCCAGGATGTTCCAAAACTACCCTTGCTAAAGCTGCTGCACATGCTGCCCAAGCATCTTTCTTTTCCTTAAGTGGTGCAGAATTGTATTCGATGTATGTTGGAGAGGGGGAAGCTTTGCTTCGTAAAACATTTCAGAGAGCACGCCTTGCGGCACCCAGTATAATATTCTTTGATGAGGCTGATGTGGTGGCTGCCAAACGGGGTGACAGTTCAAGCAATAGTTCTACAGTTGGAGAAAGACTTTTATCCACTCTGCTGACTGAGATTGATGGCTTAGAAGAAGCTAAAGGAATTCTTGTTTTGGCAGCTACAAATCGCCCCTATGCAATTGATGCTGCACTTATGCGTCCTGGGCGTTTTGATCTGGTTCTATATGTGCCACCACCTGATCTGGAGGCTCGATATGAGATACTTTGTGTACATACACGTAAGATGAAAATAGGGAATGATGTTGATCTCAGAAATCTAGCAGAAGACACAGAACTCTTCACAGGTGCTGAACTGGAGGGATTATGCAAGGAAGCTGGAATTGTAGCTCTAAGGGAAGACATATCTGCCACTGTTGTTTGTGACCGCCATTTTTGGCTTGCGAAGAATTCTTTAAAACCAGCATTAACAAAAGCGGAAATTGACTCTTACTCATCTTTCATGAAGACCTCTCGAGCTTTGCCTGAAGCAGGTTTGAAACCAGATAAAAACAAAAAGAAGAGGTTGGATCCTTTGTCTTTGGTCAAAATTGGGGTTGTCAGCTGTTTGTTACTTGCTGTTGCTGAATACTATATTATTCATGGAGACCAAAGTGTACGTGATGTAGCTACCTGA 1941 0.4348 MWTKLAQSIYNEPVKDFGLGCSVSKPNISLVSPSVCYDFMCEEMESCTSNSSDNNNHWRAEDAIGGNAEALQALRELIIFPLHFSHQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVQECGAHLTIISPHSVHRAHAGESERILRDAFSEASSHVALGKTSVIFIDEIDALCARRDSKREQDVRVASQLFTLMDSNKPTISTPGVVVVASTNRVDAIDPALRRSGRFDAEIEVTVPNEEERFQILKLYTKTIPLDPSLDIKSIAASCNGYVGADLEALCREATMFAIKRSSNTKDASNFILTMEDWKNARSVVGPSITRGVTVEIPKVTWEDIGGLKELKKKLQQAVEWPIKNSAAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRKTFQRARLAAPSIIFFDEADVVAAKRGDSSSNSSTVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHTRKMKIGNDVDLRNLAEDTELFTGAELEGLCKEAGIVALREDISATVVCDRHFWLAKNSLKPALTKAEIDSYSSFMKTSRALPEAGLKPDKNKKKRLDPLSLVKIGVVSCLLLAVAEYYIIHGDQSVRDVAT 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6876g00002 646 Gene3D - 48 234 IPR027417 -
Mupr6876g00002 646 Gene3D - 503 594 - -
Mupr6876g00002 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 587 IPR027417 -
Mupr6876g00002 646 Gene3D - 318 502 IPR027417 -
Mupr6876g00002 646 CDD RecA-like_CDC48_r2-like 339 499 - -
Mupr6876g00002 646 Pfam AAA+ lid domain 258 299 IPR041569 -
Mupr6876g00002 646 Pfam AAA+ lid domain 523 567 IPR041569 -
Mupr6876g00002 646 PANTHER AAA-FAMILY ATPASE 46 593 - -
Mupr6876g00002 646 FunFam Cell division control protein 48 homolog B 56 234 - -
Mupr6876g00002 646 FunFam Cell division control protein 48 homolog B 236 317 - -
Mupr6876g00002 646 FunFam Cell division control protein 48-B-like protein 318 502 - -
Mupr6876g00002 646 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 449 468 - -
Mupr6876g00002 646 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 103 122 - -
Mupr6876g00002 646 Pfam ATPase family associated with various cellular activities (AAA) 99 233 IPR003959 GO:0005524|GO:0016887
Mupr6876g00002 646 Pfam ATPase family associated with various cellular activities (AAA) 368 500 IPR003959 GO:0005524|GO:0016887
Mupr6876g00002 646 FunFam spermatogenesis-associated protein 5-like protein 1 502 588 - -
Mupr6876g00002 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 317 IPR027417 -
Mupr6876g00002 646 CDD RecA-like_CDC48_NLV2_r1-like 63 233 - -
Mupr6876g00002 646 ProSitePatterns AAA-protein family signature. 471 489 IPR003960 GO:0005524|GO:0016887
Mupr6876g00002 646 Gene3D - 236 317 - -
Mupr6876g00002 646 SMART AAA_5 95 237 IPR003593 GO:0016887
Mupr6876g00002 646 SMART AAA_5 364 503 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6876g00002 Mupr-Chr6876 4745 13338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6876g00002 303 589 Calmodulin-binding Proteins AT3G56690 46.690 7.80e-79 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6876g00002 - - gmx:100814288 1063.52