Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6875g00005 ATGCAAGATATGAAGCAGCAGCAGCAGCAGAAGCAGAAGCAACCGGTCAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAGGATGATATTCTCAGGGAGCAGATTGGTCTCCATGGAACTGAAAATTGGGCAATTATTGCTTCTAAATTCAAGGATAAAACCACAAGGCAGTGCAGAAGAAGATGGTACACTTATTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACATGCTTTTATGTGAGGCTCAAAAAATATTTGGTAACAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAACGCTGTGAAAAACCGTTTCTCCACATTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATACATCAATTCAAACAACAAAAGGATATTTCTCCAGCACGGGTGTGATACAGAGGTAGCATCAGAATCTGCTGTAGCTATTAAGAAGATGAGGAGGTCCCATATCCCTGATGCCGCAGAAAAGATCAACTTTGGAGACAGATCACATAAACAAAATGGGATTCCAATAAATCAGCAGACAAGAGCACCATTTGCAGTTTTAGCTCAAAACTCTTGCAATGTCAACTTGCCAGACCAGCATCATGTCTGCAATTTGAAGTTTAGTGATTATGCTCAAAACAACAAGATTCAAGGAACATTCCTTAAAAGGGATGACCCAAAGATAAGCGCATTGATGCAACAAGCAGAGTTACTAAGTTCACTAGCTCAAAAAGTTGATGCAGAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTGAACCGAACCAAAGAATCAGACCTTCCTAGATATAAGATTCCAGATTTACAGCTTGTAGATCTTAAGGATTTGTTGGAGGACTTAAAGAGCAGTAGTGAGGAAATCCAGCCATGCTGGAGGCAAATGGAACTATATGAAGACTCTCCAGGCAGTTCTGAATACAGTACAGGATCAACTCTCATGCCTCATTCAGCCAGTGAGAATTTGGAACACTCGTTGCATCAGGATATTGGAACTGAACTGAATATGCAAATTGGAGATCCAAAAGGAGTAAGGGGATGTGACCAAGGGGTTCTTTCTAGTGCAACTCTGGATCAAGATTTATTTCCATCTTGTGAGGAACAGATAAACAATGATGGCATTGTTTCTGCCTTGTCAAGTTTGTCGGAGTTCAGTTCACCTCTTCAAGTTACCCCACTGTTTAGATCCTTAGCTGCTGGAATTCCTAGCCCACAATTTTCAGAAAGAAAGGAACTTCCTTATGAAAACACTCGGAATGGAGTCTCCGTCGCTCAACCCAAGTGCCAACCCCTCACAACCGCCACTCTGCAAAAGAGCCCTCTTAATATGAATCTCTAA 1434 0.4163 MQDMKQQQQQKQKQPVNEESKKKERHIVTWTQEEDDILREQIGLHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSYINSNNKRIFLQHGCDTEVASESAVAIKKMRRSHIPDAAEKINFGDRSHKQNGIPINQQTRAPFAVLAQNSCNVNLPDQHHVCNLKFSDYAQNNKIQGTFLKRDDPKISALMQQAELLSSLAQKVDAENMDQSLENAWKVLQEFLNRTKESDLPRYKIPDLQLVDLKDLLEDLKSSSEEIQPCWRQMELYEDSPGSSEYSTGSTLMPHSASENLEHSLHQDIGTELNMQIGDPKGVRGCDQGVLSSATLDQDLFPSCEEQINNDGIVSALSSLSEFSSPLQVTPLFRSLAAGIPSPQFSERKELPYENTRNGVSVAQPKCQPLTTATLQKSPLNMNL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6875g00005 477 Gene3D - 17 78 - -
Mupr6875g00005 477 SMART sant 26 75 IPR001005 -
Mupr6875g00005 477 SMART sant 78 126 IPR001005 -
Mupr6875g00005 477 Pfam Myb-like DNA-binding domain 30 90 - -
Mupr6875g00005 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 77 IPR017930 -
Mupr6875g00005 477 CDD SANT 29 73 IPR001005 -
Mupr6875g00005 477 PANTHER MYB PROTEIN-RELATED 29 187 - -
Mupr6875g00005 477 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Mupr6875g00005 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Mupr6875g00005 477 MobiDBLite consensus disorder prediction 1 26 - -
Mupr6875g00005 477 FunFam Transcription factor MYB124 22 78 - -
Mupr6875g00005 477 ProSiteProfiles Myb-like domain profile. 30 73 IPR001005 -
Mupr6875g00005 477 SUPERFAMILY Homeodomain-like 26 120 IPR009057 -
Mupr6875g00005 477 CDD SANT 82 123 IPR001005 -
Mupr6875g00005 477 Gene3D - 81 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6875g00005 Mupr-Chr6875 41849 47492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6875g00005 18 325 MYB Transcription Factor Family AT2G02820 65.176 3.47e-142 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6875g00005 Myb_DNA-bind_6 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6875g00005 K09422 - gmx:100807667 782.711