Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6868g00001 ATGACGCAAATTTCGTCGAGCATGTACTTGCCAGAAATTGGAATGGAGGACCCCACTCTGTTTCATCAATACCCGATGATGGATCCTTTTGCATTCCAGCTAGATGAATTTGACTTTGAGTCCCTCTCCGCGTCCCCAAAGAGCTCTTCCTCTCACAAGCGCTTCAACTCCGAAAGCACACAAAACTCTTCACTCACTCAAAGTCCTGAACAATCTGTTGCCCCATCAAGACCAACCAAGCATCCCAAGATTATGAGTACCTGGAGTGCTTACGGCACTCACATGATGGCTTCCAAGGCTTCTTCCTCTTCATCCTCCAAAATCATCTCCTTTGAGAACTCCAATGCATCCTCAGTTTCTTCCCAACAATTCTACAACCTGGATGCTGCCAAACTTAAGAAGCCTAAAATTGAAACTGGGTACGGTGAAAACTTGGATTTTGCAGCTGCGGTTTCTCGAGGTGCCTATGACAACAATACCTTTCTAGACTATGATAAACGAGAGAAGAAGCTGCCTGCAACTACAACCACTAGAAACCCAAATCAAGCTCAAGATCATGTAATAGCCGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTCATTGCTCTTTCCGCCATAGTTCCTGGACTCAAGAAGATGGACAAGGCTACCGTGTTGGAAGATGCTATAAAGTACGTGAAACAACTACAGGAACGGGTGAAGACTCTGGAGGAACAAGCTGTGGATAAAACAGTTGAATCAGCAGTGTTTGTGAAGAGATCTGTTGTACTCGCCGGCGACGATAGCTCCTCCTCCGATGAAAACTCCGACCAGTCACTCCCCGAAATCGAAGCAAGAATTTCTGGTAAAGAAGTACTCATCAGAATCCACTGCAACATACACAGTGGGCAAGCAGCTGCTATACTAAGGGAATTAGAGAAACATCATCTCACAGTTCAGAGTAGCAGCTTTTTGCCCTTTGGGAATAACACACTTGACATAACTATTGTTGCTCGGATGAACAAGGACTACTGCTTGAAAGCAAAGGATCTCATAAAAAGCTTAAGTCAGTGTTTGAGGGAGCTTTGA 1071 0.4491 MTQISSSMYLPEIGMEDPTLFHQYPMMDPFAFQLDEFDFESLSASPKSSSSHKRFNSESTQNSSLTQSPEQSVAPSRPTKHPKIMSTWSAYGTHMMASKASSSSSSKIISFENSNASSVSSQQFYNLDAAKLKKPKIETGYGENLDFAAAVSRGAYDNNTFLDYDKREKKLPATTTTRNPNQAQDHVIAERKRREKLSQRFIALSAIVPGLKKMDKATVLEDAIKYVKQLQERVKTLEEQAVDKTVESAVFVKRSVVLAGDDSSSSDENSDQSLPEIEARISGKEVLIRIHCNIHSGQAAAILRELEKHHLTVQSSSFLPFGNNTLDITIVARMNKDYCLKAKDLIKSLSQCLREL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6868g00001 356 CDD bHLH_AtNAI1_like 183 255 - -
Mupr6868g00001 356 MobiDBLite consensus disorder prediction 43 75 - -
Mupr6868g00001 356 Gene3D - 173 245 IPR036638 GO:0046983
Mupr6868g00001 356 PANTHER BHLH TRANSCRIPTION FACTOR 26 353 - -
Mupr6868g00001 356 Pfam Helix-loop-helix DNA-binding domain 184 231 IPR011598 GO:0046983
Mupr6868g00001 356 MobiDBLite consensus disorder prediction 43 84 - -
Mupr6868g00001 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 241 IPR036638 GO:0046983
Mupr6868g00001 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 230 IPR011598 GO:0046983
Mupr6868g00001 356 SMART finulus 187 236 IPR011598 GO:0046983
Mupr6868g00001 356 Coils Coil 220 247 - -
Mupr6868g00001 356 FunFam Basic helix-loop-helix family protein 178 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6868g00001 Mupr-Chr6868 1277 2896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6868g00001 173 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 52.688 9.52e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6868g00001 HLH 9.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6868g00001 - - gmx:100798011 500.745