Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6867g00004 ATGGAAAAAGTGGCTACGCCTCCGATTCTGATGCACAGGAAGCGCGATCTGTCGTACGGCGTCGTTTCGCCGAGCGAGAGCTGGAAGTGGGACTGGGACAGCGTGCGGTTCGCGGGAAAACCGCCACCGTCGTCCTCGAACGATGACGTCGTTTTCGAGGAGGAGAGTGCGCCTTTGCAGCTAAACCTCGGCGGGAGGGTGAACAAGCGGGTGCGCTCGGGGTCGCCCGGAACGGCGTCGTATCCGATGTGTCAGGTTGATAACTGCAGAGAGGATCTGTCCAAGGCGAAGGACTATCACCGGAGGCACAAGGTGTGTGAGGCTCACAGCAAAGCCTCCAAGGCGCTTCTCGCCAATCAAATGCAACGCTTCTGCCAGCAGTGTAGCAGGTTTCACCCCTTGTCGGAGTTTGACGAGGGCAAGCGGAGCTGTCGCCGGAGACTCGCCGGACACAATCGTCGCCGGAGGAAGACGCAGCCGGAGGATGTTACTTCCTCCACGCCCGCACCCGCCGCGGCCAATTTGGAAATCTTCAACTTGTTGACTGCTATAGCTGGAGCTTCTCAGGGAAAATTTGAGGAAAGAAGGTCACAAGTTCCAGATAGAGAACAGCTTGTTCAGATTCTCAATAGGATACCTTTGCCTGCCGATCTTGCAACCAAGTTGCTGGATGCTGGTAATGTCAATGGAAAAAAAGATCATGTGCAATTGCAAACACCATCTTCCTATCATCGTCATGGTCATGACCAACGGAACGACACAACCCCATCTGCCCCATTAACTATGGACTTGCTTGCTGTTCTTTCCACCACTCTTTCTGGGTCTGCCCCTGATGCCATTGCATCGCCCTCTCAAAATCGCAGCTGTAGTAGTGATGGTGGCAGTGACAAGTTTAGGAATAGCGCTGATCAGACGATACGACAGCAGTTCTTTTCGGTTGGGGGAGAAAGAAGCAGTAGCAGTTCCCAGTCTCCAGTTGAAGATTCAGACTGCCAGGAGGATGTTCGAGTTAATTTACCACTGCAACTCTTTAGCTCCTCTCCGGAGGATGACAGCCTGCCTAAACTAGCATCTTCGAGAAAGTATTTCTCATCTGACAGTAGTAACCCTGCTGACGAGATGTCCCCATCATCTTCTCCTCCTGTTGTGGAGATGCAGTTTGATTTGCAGGGTGGGGTTAGAGGTCTTAAGCCAGAGAGCATATCCTCTGGAAGAGGAGTTAATGCAAATAAGGAAGCTAGCCAAAGTCATAGTTGTAATATCTCTCTTGATCTATTTAAAGGATCAAATAACAGGGTCCAACAACCTAGTTCGCATCAAAGTGTTCCATTTCAAGCGGGGTATACATCTTCAGGCTCTGATCATTCACCTCCCAGTTTAAATTCAGATGCTCAGGATCGCACTGGGAGAATAATGTTTAAACTATTTGACAAGCATCCCAGCCATTTCCCAGGAACATTGCGAGCACAGATTTACAGTTGGCTTTCTAATAGGCCATCAGATATGGAGAGCTACATAAGGCCTGGTTGTGTGGTCCTATCACTTTATGCTTCAATGTCTTCTGCTGCATGGGAGAAACTAGAAGAAAACTTCCTCCAACAAGTTCATTCTTTAATTCAAAATTCAGATTCCGATTTTTGGAGAAATGGAAGGTTTCTAGTTCATTCTGGCAGTCAGTTGGCTTCACACAAAGATGGGAAGATACGCTTATGCAAATCATGGAGAACATGGAAGTCACCAGAGTTGATATCCGTGTCCCCGTTGGCAATTGTTAGCGGACAAGAAACCTCTATTTCATTGAAGGGTAGAAACCTGTCAACACCTGGCACAAAGATTCATTGCACAGGTACTGGCTCTTACACATCGGCAGAAGTCATAGGATCTGTATATCCTGGTGTGATGTATGATAAGATAAAGTTGGGTGGTTTTAAAGTCCAGGATGTATCTCCTGGTGTTCTGGGTCGCTGTTTTATTGAGGTTGAAAATGGTTTCAAGGGTAACAGTTTTCCAGTGATAATAGCTGATGAGACCATTTGCAAGGAATTGAGACCACTTGAGTCTGAATTTGATGAGGAGGAAATAATATGTGATGCCATTTCAGAGGAGCATGAACATCATTTTGGAAGGCCCAGGTCAAGGGAGGAGGCTTTGCACTTCCTGAATGAGCTTGGCTGGCTGTTCCAAAGAGAAAGGTTCTCATACGTGCACGAGGTTCCATATTATTCACTTGACAGGTTCAAATTTGTACTCACATTTGCTGTGGAAAGAAACTGTTGCATGTTAGTCAAAACCCTTCTGGATGTGCTGGTTGATAAACATTTGCAAGGGGAATGGTTGTCATCAGGGTCAGTGGAGATGCTGAATGCAACCCAACTCTTAAATAGAGCAGTGAAAAGAAAGTACAAAGGCATGGTTGATTTGCTCATCCACTATACTATACCGAGCAAATATAGTACATCCAGGAAATATGTATTTCCACCTAATCTTGAGGGTCCTGGTGGTATTACACCCTTGCACTTGGCAGCATGCACATCAGGCTCTGAGAGTGTTGTTGACTCTTTAACAAGTGACCCACAGGAGATTGGGTTGAAGTGCTGGGAATCCCTTGTGGATGCAAATGGGCAGACTCCGCATGCCTATGCCATGATGAGGAATAATGACTCTTATAATGCACTGGTTGCCCGTAAACTTGCTGAAAGAAGGGGTGAGATGTCACTAACAATTGAGAGTGAGATAGAGCAACTGTCACTGAGAGTGGAGCTTAAGCAAAAGCAAAGTAATTTAGTAAAACGAGGTCAAAGTTCTTGTTCCAAGTGTGCGATTGCAGAAATTAACTACAACAGAGGAGTTCCAGGTTCTCAGGGCTTGCTTCACCGCCCCTTTATTTATTCAATGCTAGCTGTTGCTGCTGTTTGTGTATGTGTTTGTTTGTTCTTCCGTGGACGCCCATTCGTTGGCTCAGTTGCTCCCTTCAGTTGGGAAAATCTGGATTATGGCACAATATCCGTTTTCTGTTTGTTCCGAGATTGTTTGGGTCCTTCAGTTTGCTACATCCTTCCATTGCGCGTGGGTACATGCAAGACGTTC 3087 0.4681 MEKVATPPILMHRKRDLSYGVVSPSESWKWDWDSVRFAGKPPPSSSNDDVVFEEESAPLQLNLGGRVNKRVRSGSPGTASYPMCQVDNCREDLSKAKDYHRRHKVCEAHSKASKALLANQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSSTPAPAAANLEIFNLLTAIAGASQGKFEERRSQVPDREQLVQILNRIPLPADLATKLLDAGNVNGKKDHVQLQTPSSYHRHGHDQRNDTTPSAPLTMDLLAVLSTTLSGSAPDAIASPSQNRSCSSDGGSDKFRNSADQTIRQQFFSVGGERSSSSSQSPVEDSDCQEDVRVNLPLQLFSSSPEDDSLPKLASSRKYFSSDSSNPADEMSPSSSPPVVEMQFDLQGGVRGLKPESISSGRGVNANKEASQSHSCNISLDLFKGSNNRVQQPSSHQSVPFQAGYTSSGSDHSPPSLNSDAQDRTGRIMFKLFDKHPSHFPGTLRAQIYSWLSNRPSDMESYIRPGCVVLSLYASMSSAAWEKLEENFLQQVHSLIQNSDSDFWRNGRFLVHSGSQLASHKDGKIRLCKSWRTWKSPELISVSPLAIVSGQETSISLKGRNLSTPGTKIHCTGTGSYTSAEVIGSVYPGVMYDKIKLGGFKVQDVSPGVLGRCFIEVENGFKGNSFPVIIADETICKELRPLESEFDEEEIICDAISEEHEHHFGRPRSREEALHFLNELGWLFQRERFSYVHEVPYYSLDRFKFVLTFAVERNCCMLVKTLLDVLVDKHLQGEWLSSGSVEMLNATQLLNRAVKRKYKGMVDLLIHYTIPSKYSTSRKYVFPPNLEGPGGITPLHLAACTSGSESVVDSLTSDPQEIGLKCWESLVDANGQTPHAYAMMRNNDSYNALVARKLAERRGEMSLTIESEIEQLSLRVELKQKQSNLVKRGQSSCSKCAIAEINYNRGVPGSQGLLHRPFIYSMLAVAAVCVCVCLFFRGRPFVGSVAPFSWENLDYGTISVFCLFRDCLGPSVCYILPLRVGTCKTF 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6867g00004 1029 MobiDBLite consensus disorder prediction 312 415 - -
Mupr6867g00004 1029 MobiDBLite consensus disorder prediction 429 464 - -
Mupr6867g00004 1029 SUPERFAMILY Ankyrin repeat 749 894 IPR036770 -
Mupr6867g00004 1029 ProSiteProfiles Zinc finger SBP-type profile. 81 158 IPR004333 GO:0003677
Mupr6867g00004 1029 FunFam Squamosa promoter-binding-like protein 14 75 145 - -
Mupr6867g00004 1029 SUPERFAMILY SBT domain 82 162 IPR036893 GO:0003677|GO:0005634
Mupr6867g00004 1029 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 48 832 IPR044817 GO:0003677
Mupr6867g00004 1029 MobiDBLite consensus disorder prediction 276 299 - -
Mupr6867g00004 1029 Pfam SBP domain 84 157 IPR004333 GO:0003677
Mupr6867g00004 1029 MobiDBLite consensus disorder prediction 339 384 - -
Mupr6867g00004 1029 MobiDBLite consensus disorder prediction 312 328 - -
Mupr6867g00004 1029 Gene3D - 74 145 IPR036893 GO:0003677|GO:0005634
Mupr6867g00004 1029 MobiDBLite consensus disorder prediction 149 169 - -
Mupr6867g00004 1029 MobiDBLite consensus disorder prediction 239 258 - -
Mupr6867g00004 1029 Gene3D - 744 922 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6867g00004 Mupr-Chr6867 24166 29902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6867g00004 8 1001 SBP-box Gene Family AT1G20980 52.746 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr6867g00004 SBP 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6867g00004 - - gmx:100812180 1756.88