Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6866g00009 ATGGCTTCAAGATTCTGGAACCAGGGTGGAAGTGAGTCCGAGGAGGAGGAGAGTGATTATGACGAGGAGGTTGAAGCCGCGGCGGGTGAATCCGCGAATCAAGCTGTGACGAGCAGGTACCTGCAGGAAAATGCAAGTGACAGTGACGATTCCGATGGCCAAAAGCGCGTTGTGAGGTCGGCGAAGGATAAGCGATTCGAGGAGATGGCGTCCACTGTTGACCAGATGAAGAATGCGATGAAGATCAATGACTGGGTGAGCTTGCAAGAGAGCTTTGACAAGATTAACAAACAGCTTGAGAAGGTCATGCGTGTGACTGAGTCTGACAAGGTTCCGAATCTCTACATCAAGGCGCTTGTGATGTTGGAAGATTTCTTGGCTCAGGCTTTGGCTAATAAGGATGCCAAGAAGAAAATGAGTAGTAGCAATGCCAAGGCCTTGAATTCGATGAAGCAGAAGCTGAAGAAGAATAATAAGCAGTATGAGGACTTGATTAATAAGTGCAGGGAGAATCCCGAGAGTGAGGAGGAAAAGGAAGAGGAGGAGAGCGAGGAAGAGTATGAGAGTGATGATGAGATTATTGAGCCAGAGCAGCTTAGGAAACCTGAGGCTAAGTCTGATTCTGAAGCCTCTCAGTATGACGATGAAAAGCTGGATACTGGCGATGGTCCTTGGGACCAAAAGCTGAGCAAGAAGGACAGACTTTTGGATAGACAATTCATGAAAGACCCTAGTGAGATCACTTGGGACACTGTTAACAAGAAGTTTAAGGAAGTTGTGGCTGCTAGGGGCAGGAAGGGAACTGGGAGATTTGAACAGGTTGAGCAACTTACTTTCTTGACGAAGGTTGCTAAGACACCTGCACAGAAGCTGGAAATTCTGTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCGGGCCTCAATGGGCATATGCCCATAAATGTGTGGAAAAAATGTGTGCAGAACATGCTGGTTATTCTTGATATTCTAGTGCAGTACCAAAACATAGTGGTTGATGATTCGGTGGAACCAGATGAGAATGAAACCCAGAAAGGGACTGACTATAATGGACCAATTCGGGTTTGGGGCAACTTGGTTGCTTTCTTAGAAAGAGTTGATGTTGAGTTTTTCAAGAGCCTGCAGTGCATAGATCCTCATACACGGGACTATGTTGAGAGACTCAGGGACGAGCCCTTGTTTCTGGTTCTTGCTCAGAATGTCCAGGAATATCTTGAAAGAGTTGGAAATTTCAAAGCTGCTTCTAAGGTGGCCTTGAGGAGGGTTGAGCTCATTTACTACAAACCACAAGAGGTTTATGATGCAATGAAAAAATTGACTGAGCTGACAGAGGATGGAGATAATGGAGGGGAGGCAAGTGAGGAGTCAAAAGGATTTGATGATTCAAGAATTCCTACTGCATTTGTTGTTACCCCCGAGGTTGTGGCCCGGAAGCCCACCTTCCCTGAGAATAGCAGGAGCATAATGGATGAATTGGTATCATTGATATACAAGTATGGAGATGAGCGAACTAAAGCACGAGCAATGCTTTGTGATATATACCACCATGCTCTTGTTGATGAGTTCTCTATGGCCCGGGATCTGCTGCTTATGAGCCATTTGCAAGACAGTGTTCAGCATATGGACATTTCAACACAAATACTTTTTAACAGGGCTATGTCACAGTTAGGTTTATGTGCTTTTAGGGCTGGACTGATTTCTGAAGCACATGGCTGTCTGTCCGAACTGTACTCTGGTGGAAGGGTCAAGGAGTTGCTTGCCCAAGGTGTGTCACAAAGTCGTTATCATGAGAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCGTATCATATGCACATCAATCTTGAGCTCCTGGAGGCAGTACATCTTGTATCTGCTATGCTGCTGGAAGTTCCCAATATGGCAGCCAATGTTCATGATGCAAAACGAAAAGTCATTAGTAAGACGTTCCGTCGCTTGCACGAGATTAGTGAGAAACAAACATTCACTGGTCCACCAGAAAATGTCAGAGATCATGTTATGGCTGCCACGAGGGTTCTTAGCAAGGGAGACTTCCAGAAGGCTTTTGACATTATTGTGTCTCTTGATGTATGGAAATTTGTGAGGAATCGAGACACCGTGCTTGAAATGCTGAAGGACAAAATCAAGGAGGAGGCATTGAGGACATACCTCTTTACCTTCTCTTCATCTTATGAATCCTTGAGCCTGGATCAGCTCGCTAAATTTTTTGATATCACTGTTTCTTGCACTCATAGCATTGTCAGTAGGATGATGATCAATGAGGAGCTTCATGCGAGCTGGGACCAGCCAACTGGGTGCATTGTTTTCCAAGATGTTGAACACTCTAGGCTGCAGGCATTGGCATTCCAGTTGACAGAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGGGCAACAGAGGCAAGGATAGGTGGTGGTGGATTGGATCTGCCTCTAAGGCGGAGAGATGGCCAGGACTATGCTGCTGCCGCAGCCGGTAGTGGAGCAGCCTCTTCAGGTGGTAGATGGCAAGACCTGTCCCTTTCTCAGCCAAGGCCAAGCAGTGGGCGTGCAGGATATGGTAGCAGTGGTGGAAGGTCAATGGCATTGGGCCAAGCAGCTGGGAGTGGCTACTCAAGGGATCGCATGGGACGAGGAACAGGTGCTGGCTATCAGAGTGCACGATATCATGATGGTTCATATGGAGGTTCAGGGAAGACTGCTCAAGGGGGTTCAGCATTGAGGGGACCCCAGGGCGATGTATCTACTCGCATGGTTAGCCTTAAGGAAATCGCCTGTGATTCAACAGAGACACGTGTAAAGGTCGGGAAAGAAATCAAATTCGATGGAAGCAAGAATTTGGTTGGGAGGGAGCTCCGAAACCCCAAT 2922 0.4671 MASRFWNQGGSESEEEESDYDEEVEAAAGESANQAVTSRYLQENASDSDDSDGQKRVVRSAKDKRFEEMASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESDKVPNLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKCRENPESEEEKEEEESEEEYESDDEIIEPEQLRKPEAKSDSEASQYDDEKLDTGDGPWDQKLSKKDRLLDRQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQYQNIVVDDSVEPDENETQKGTDYNGPIRVWGNLVAFLERVDVEFFKSLQCIDPHTRDYVERLRDEPLFLVLAQNVQEYLERVGNFKAASKVALRRVELIYYKPQEVYDAMKKLTELTEDGDNGGEASEESKGFDDSRIPTAFVVTPEVVARKPTFPENSRSIMDELVSLIYKYGDERTKARAMLCDIYHHALVDEFSMARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRAGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEVPNMAANVHDAKRKVISKTFRRLHEISEKQTFTGPPENVRDHVMAATRVLSKGDFQKAFDIIVSLDVWKFVRNRDTVLEMLKDKIKEEALRTYLFTFSSSYESLSLDQLAKFFDITVSCTHSIVSRMMINEELHASWDQPTGCIVFQDVEHSRLQALAFQLTEKLSILAESNERATEARIGGGGLDLPLRRRDGQDYAAAAAGSGAASSGGRWQDLSLSQPRPSSGRAGYGSSGGRSMALGQAAGSGYSRDRMGRGTGAGYQSARYHDGSYGGSGKTAQGGSALRGPQGDVSTRMVSLKEIACDSTETRVKVGKEIKFDGSKNLVGRELRNPN 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 134 229 - -
Mupr6866g00009 974 Coils Coil 144 171 - -
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 45 63 - -
Mupr6866g00009 974 SUPERFAMILY "Winged helix" DNA-binding domain 716 791 IPR036390 -
Mupr6866g00009 974 ProSiteProfiles PCI domain profile. 620 792 IPR000717 -
Mupr6866g00009 974 Pfam PCI domain 660 788 IPR000717 -
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 1 63 - -
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 194 229 - -
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 175 193 - -
Mupr6866g00009 974 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 43 652 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 135 154 - -
Mupr6866g00009 974 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 871 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 155 174 - -
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 841 934 - -
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 12 26 - -
Mupr6866g00009 974 Gene3D - 727 796 IPR036388 -
Mupr6866g00009 974 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 939 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr6866g00009 974 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 721 809 IPR000717 -
Mupr6866g00009 974 MobiDBLite consensus disorder prediction 851 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6866g00009 Mupr-Chr6866 76997 81031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6866g00009 1 939 Eukaryotic Initiation Factors Gene Family AT3G56150 68.882 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6866g00009 K03252 - gmx:100805203 1581.62