Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6866g00006 ATGGGAAGAGGTAGAATTTTGCCTCTGTTCTGGTCGAAGCATAAGCAAGCATCCCAAAACCCTAGCCGCTTTCGTCCTTCGTCTTTTGCATCAGTCCTCCTCCAACAAGTATCTGGTGTAGGTTTTATCCTATGGAACAAGGTTTACTTGAAGAGGGATATTTTAGGGTTTGGATTTGGAAGGATGGAGTCTCAGGTGAAGCACGCCATTGTTGTCAAAGTTATGGGTCGTACTGGATCCAGAGGACAGGTGACCCAGGTCAGAGTGAAGTTTTTGGATGATCAGAACCGTCACATAATGAGGAATGTGAAAGGACCTGTGAGAGAAGGAGACATTCTCACCCTACTCGAGTCTGAGAGGGAAGCAAGAAGATTGCAATATGCGTTTGGATTAATATGTTATTTGGCTTCTATATCTATTCCTGCAACATCGTCCTCTATTGGACAGTGGTCACGAAATAACTTCAAATCTCTCAAGTTTAAATGGGCGGCGACTGCATATCTTTTAAACTGA 513 0.4366 MGRGRILPLFWSKHKQASQNPSRFRPSSFASVLLQQVSGVGFILWNKVYLKRDILGFGFGRMESQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRLQYAFGLICYLASISIPATSSSIGQWSRNNFKSLKFKWAATAYLLN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6866g00006 170 CDD S1_S28E 67 125 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mupr6866g00006 170 Pfam Ribosomal protein S28e 65 125 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mupr6866g00006 170 Hamap 30S ribosomal protein S28e [rps28e]. 62 126 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mupr6866g00006 170 Gene3D - 60 126 IPR012340 -
Mupr6866g00006 170 SUPERFAMILY Nucleic acid-binding proteins 62 126 IPR012340 -
Mupr6866g00006 170 FunFam 40S ribosomal protein S28 61 126 - -
Mupr6866g00006 170 ProSitePatterns Ribosomal protein S28e signature. 117 125 IPR028626 -
Mupr6866g00006 170 PANTHER 40S RIBOSOMAL PROTEIN S28 62 126 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6866g00006 Mupr-Chr6866 38342 39758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6866g00006 62 126 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 86.154 2.41e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6866g00006 K02979 - gmx:100811085 126.331