Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6866g00002 AGGTTTAGAGACAGAGAATTTAGAATTTCCCTGGGAGTATTGGTGGGCAAAGAGATGGGGGATCACTTTGAGTTGCTGGTTGATCGTTTGCTTACTGAATCCACATTAGAAGCTGCACTTGAAAGCAGGAATAGGTCAATGCTGGCCGCGTCCTCGGCGGTGAATGATGCAAAGATTGATCTCGATTTGATGAAGATGGCTGTGGATGATATCAAGTATCCAGGGAAGCTGGTAGAATGCAGGATATGTCATGATGATGATGAGGATTCCAATATGGAGACACCCTGCTCTTGTTGTGGTAGTTTGAAGTACGCCCACCGCAGATGTATACAACGATGGTGTAATGAGAAGGGTGACACCACCTGTGAGATATGCCACCAGCAATTCAAGCCTGGTTATACAGCTCCTCCGCCACTATTTCAGTTTGGACGTATTCCAATGAGTTTCAGGGGAAATTGGGAGATTTCAAGAAGAGACTTGAATAGTACTCATCTGGTTAGCATGGTCCCCACCGACCAGAACCTTACAGCTTCTAACTATGATCAATATTCAGCCTCTGCTACAGGAAGTTTGATTTGCTGTCGTTCAATTGCTGTCATTTTCATGGTTCTTCTGATTTTAAGACACACACTTCCCCTAGTAATTAGTGGAAATAAGGAGTATTCTTTCCCTCTCTTTTTGCTGTTGTTATTTCGGACTGCTGGAGTTATTCTTCCCATATACTTCATGGTTAGAGCAGTGGCATTAATCCAGCGGCATCGGCGACAACATCGAGAGCATCTTAATGCCTCGGCCAGTTCATCTGATGATGAAAGCGAGCAAGCAGCTTTGCAGCCTCAGCCTCATGTCATACATATGGAGACAACTTCCCTCAAGTTTGCTGAGGATGGGGACAGTGAGATTCAGATGTGCAAC 915 0.4492 RFRDREFRISLGVLVGKEMGDHFELLVDRLLTESTLEAALESRNRSMLAASSAVNDAKIDLDLMKMAVDDIKYPGKLVECRICHDDDEDSNMETPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQQFKPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPTDQNLTASNYDQYSASATGSLICCRSIAVIFMVLLILRHTLPLVISGNKEYSFPLFLLLLFRTAGVILPIYFMVRAVALIQRHRRQHREHLNASASSSDDESEQAALQPQPHVIHMETTSLKFAEDGDSEIQMCN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6866g00002 305 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 19 257 IPR033275 -
Mupr6866g00002 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 135 IPR013083 -
Mupr6866g00002 305 SMART ringv_2 79 126 IPR011016 GO:0008270
Mupr6866g00002 305 Pfam RING-variant domain 80 125 IPR011016 GO:0008270
Mupr6866g00002 305 Pfam Protein of unknown function (DUF3675) 131 247 IPR022143 -
Mupr6866g00002 305 CDD RING_CH-C4HC3_MARCH 80 126 - -
Mupr6866g00002 305 MobiDBLite consensus disorder prediction 260 279 - -
Mupr6866g00002 305 FunFam Zinc finger family protein 69 135 - -
Mupr6866g00002 305 ProSiteProfiles Zinc finger RING-CH-type profile. 72 132 IPR011016 GO:0008270
Mupr6866g00002 305 SUPERFAMILY RING/U-box 78 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6866g00002 Mupr-Chr6866 8943 11034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6866g00002 79 126 C3H Transcription Factor Family AT2G37950 49.020 1.01e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6866g00002 - - vun:114190540 515.768