Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6865g00005 ACTCAAATGGTGGGTGGTAACAACCATGACCAATATAATGACACAACATTTACCAAAATTTTTGTTGGAGGGTTGGCTTGGGAGACTCAGAGGGACACAATGAGGAGGTATTTTGAGCAGTTTGGAGAGATCTTAGAGGCTGTTGTGATCACAGATAAGAACACTGGGAGATCCAAGGGTTATGGCTTTGTCACATTTAAAGATCCCGAGTCAGCCATGAGAGCATGTCAGAACCCATCTCCAGTTATTGATGGTAGGAGGGCAAACTGCAATCTAGCTTCTCTTGGTGCAAACAAGAACCGACCACCAACTTTTCAGCATGTTTACTTTGCAATTTTTGCAAACAAGTTTGAGTTTCTTAGTTATTTCATCTTAATATATTTAACTCATCCTAGGCAAGAAGCTACCACCTTTAGTGGTTGGTTATTTAGTAAAAATGTGAAACAGAAATGA 453 0.3996 TQMVGGNNHDQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPESAMRACQNPSPVIDGRRANCNLASLGANKNRPPTFQHVYFAIFANKFEFLSYFILIYLTHPRQEATTFSGWLFSKNVKQK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6865g00005 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 77 IPR000504 GO:0003723
Mupr6865g00005 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 95 IPR000504 GO:0003723
Mupr6865g00005 150 FunFam RNA-binding protein 24-B isoform X1 5 110 - -
Mupr6865g00005 150 Gene3D - 2 103 IPR012677 -
Mupr6865g00005 150 SUPERFAMILY RNA-binding domain, RBD 17 105 IPR035979 GO:0003676
Mupr6865g00005 150 CDD RRM_RBM24_RBM38_like 18 93 - -
Mupr6865g00005 150 PANTHER BOULE-RELATED 8 108 - -
Mupr6865g00005 150 SMART rrm1_1 19 91 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6865g00005 Mupr-Chr6865 32089 32756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6865g00005 14 94 C2H2 Transcription Factor Family AT2G19380 44.444 1.31e-16 73.9