Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6850g00001 ATGGATGCAATGAACAGAAGCTCCTCCTCCACTTCCTCTTCCTCCGACTCTTGCTCTTCAGAGTCCAACCATAGGAATCCCAACAAGCCCGACAGAATCAAAGGCCCGTGGAGTGCCGAAGAGGATCGGATCCTGACCCGACTCGTCGAGCGATACGGGCCACGAAACTGGTCCTTGATTAGTCGCTATATAAAGGGGAGGTCCGGCAAGTCGTGCAGGCTGCGGTGGTGCAACCAGCTGAGTCCCACCGTGGAGCACCGGCCCTTCTCGGCCCAAGAGGACCAGACCATCATAGCAGCCCACGCCCAGTACGGTAACAGGTGGGCCACCATTGCCCGATTGCTACCGGGCCGAACCGATAACGCCGTTAAAAACCACTGGAACTCCACGCTCAAGCGCAGAGCCAAGGACGGTGTTGCTATTACTAATGCTATCGCCAACCAAGGGGGCACTTCTTCTTCCGCTCCCGAGGATGACCCGTTGACCGTGTTGACTCTCGCTACCCCCGGTATTGATAACGCCGCTGTGGCCGACCACCGACCTTCGCCGGAGAGTGCGCCCGCTGGGTTTTGGGATATCATGAGGGATGTCATTGCGAGGGAAGTCAGGGAATATGTGTCTTCCAATTTTTCTGATAATAGCTCCGGTAAATTATTCTGCACTTTTATTTTGCCTTACTGGGCTTTGGAATCGGATCAGGGGAATTAA 708 0.5508 MDAMNRSSSSTSSSSDSCSSESNHRNPNKPDRIKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSAQEDQTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRAKDGVAITNAIANQGGTSSSAPEDDPLTVLTLATPGIDNAAVADHRPSPESAPAGFWDIMRDVIAREVREYVSSNFSDNSSGKLFCTFILPYWALESDQGN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6850g00001 235 MobiDBLite consensus disorder prediction 1 37 - -
Mupr6850g00001 235 FunFam MYB transcription factor 34 85 - -
Mupr6850g00001 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 84 IPR017930 -
Mupr6850g00001 235 PANTHER MYB PROTEIN-RELATED 34 161 - -
Mupr6850g00001 235 SMART sant 85 133 IPR001005 -
Mupr6850g00001 235 SMART sant 33 82 IPR001005 -
Mupr6850g00001 235 Pfam Myb-like DNA-binding domain 37 96 - -
Mupr6850g00001 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 135 IPR017930 -
Mupr6850g00001 235 SUPERFAMILY Homeodomain-like 31 127 IPR009057 -
Mupr6850g00001 235 MobiDBLite consensus disorder prediction 1 24 - -
Mupr6850g00001 235 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Mupr6850g00001 235 CDD SANT 88 131 IPR001005 -
Mupr6850g00001 235 ProSiteProfiles Myb-like domain profile. 29 80 IPR001005 -
Mupr6850g00001 235 Gene3D - 33 85 - -
Mupr6850g00001 235 CDD SANT 36 78 IPR001005 -
Mupr6850g00001 235 Gene3D - 87 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6850g00001 Mupr-Chr6850 2720 3487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6850g00001 31 148 MYB Transcription Factor Family AT3G50060 72.881 5.41e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6850g00001 Myb_DNA-bind_6 4.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6850g00001 - - gmx:100781727 333.569