Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6846g00003 CTTGCAAATCTTCATACGAAATTGAGACCTCACATACTTCAAAGAGTTATCAAAGATGTGGAGAAATCATTACCCCTCAAAATTGAGTGTATCCTTAAGGTTGAAATGTCTCCTCTTCAGAAACAGTATTATAAGTGGATTTTGGAACGTAATTTTCACAATTTAAACAAAGATGTTCGTGGGAATCAGGTTTCTCTTCTAAATATTGTTGTGGAATTGAGGAAGTGTTGTAGCCATCCCTTCTTGTTTGAAAGCACTGACCATGACTATGGTGGGGATTCAGGAAGTAGTGACAACAGAAAACTAGAGAGAATTGTCTTTAGCAGTGACATGCTTGTCATACTCGAAAAGCTGCTTGTTAGATTGCATGAAACCAAGTTACCATGTTCTCATTTTCTCTCA 402 0.3706 LANLHTKLRPHILQRVIKDVEKSLPLKIECILKVEMSPLQKQYYKWILERNFHNLNKDVRGNQVSLLNIVVELRKCCSHPFLFESTDHDYGGDSGSSDNRKLERIVFSSDMLVILEKLLVRLHETKLPCSHFLS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6846g00003 134 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 2 125 - -
Mupr6846g00003 134 Gene3D - 25 125 IPR027417 -
Mupr6846g00003 134 Pfam SNF2-related domain 2 82 IPR000330 GO:0005524|GO:0140658
Mupr6846g00003 134 Gene3D - 2 24 IPR038718 -
Mupr6846g00003 134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 123 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6846g00003 Mupr-Chr6846 4639 5547 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mupr6846g00003 SNF2_N 4.4e-10 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6846g00003 K11367 - gmx:100792398 216.853