Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6843g00002 ATGTCCTTCAATCAATCAAAGCCGGAGAAGAACGACGCCGTTTACCGAAGGACCGGGCGATCGTCCAGCTTCAATCAGCAGAGAGGTTCCTACGGCAAGGGCGGTGGCGGCGGCGGTGCTGGCGGGACCGCGCCGTCGGTCAATTCACTCCCCTCTACCCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGGTAAACCCTTCCCCGGGGAATTCAACAGAGTCCAATAATGCATCTGCTGCCCAGACCATTAATAATGGTACCCATGTACAGCCGCAATTACATGGAGCATTGGATGGGCCGGTTACAAAGTCATCTGAATCATCAGCTGCACATAGGGGTGCTGGAATTGTGCCAAAATCTCCAACTTCTCTACTGCCCCCCTTGATTTCTGATCCAGTCCCTCCCACAAGCCCTGCTAAGGGAGATGCATCTAAGGCATTCCCTTTTCAATTTGGATCCATCGTTCCTGGCTTTATTAATGGGATGGCAATTCCTGCTCGTACAAATTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCTTCACGACTCTTATAAATCTGTGCCTTCAGTGCCAATTCCTCCTGTTCCAAAGCAGCAGCAACCACCTAAGAAAGGTGCTGGTGTCACTGAGCAATCTAATGCCAGTGAGACACATATAGGGGGGACTAAAGCAAAAAGGGATCCTCAGGTGTCACCATTGACCCCAGCAAGCCAGATGCCGAAGCCCTCTGTTGTTCCTGTAACTGGGATTTCAATGTCAACACCATATCACCAGTCACAGGCTCCTTTACAGTTTGGTGGTGCTAATCCACAGATTCAATCTCAGGGTATGTCATCGGTGTCCCTCCAGATGCCTGTACCAATGCCTTTACCAATTGGCAATGCTACTCAAGTGCAACAGCCAGTTTTTGTTCCAGGTCTTCAACCTCATCCAATGCATCCTCAGGGGATCATGCATCAAGGCCAAAACATGAATTTTGCTCCTCAAATGGGTCATCAGTTGCCCCATCAATTAGGTAACATGGGCATTGGCATCGGCCCTCAATATCCCCAGCAGCAAGGAGGAAAATTTGCTGGCCCTCGAAAAACTACTCCTGTAAAGATAACTCATCCTGAGACACATGAAGAGCTGAGGCTTGATAAAATTACAGATGCATATTCTGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTCCGGCTTCTCATCCAGGGAACTATTATTCATCCAGTTCGTATAATACCAATTCTCTTTATTATCCACCTAGTTCTCTTCCATTAACAAGTGGCCTGGTAACTCCTAATTCTCAGCCACCAATATTTAATTATCCTGTGAACCATGGTCCACAAGGTGTGAGTTTCATGAGTTCATCATCACTTGGTTCCCCACCTATTAATAAAGCTAGCACTCCAACAGGGGTTACGACTGTGACCATTAAGCCAAGTGGTACGTCTGCTATTGTGGACTCATCATTGTCCAATTCCAGTATTTCTGATGTCCAAAATGGAGAATCCCCTAGTTCAACAGCATCTTCTGATGGTAGCTCCTCTGTGCTGCAAAAAGGTTCTGAAACTTGTTCAGAAATCTCTTTACAACAGTCTAAGTTGTCTAGTGATTCTGTCTTAGTTATGTCTAATAATGAAGGTGGGAGGGAATCTCTTAGTACGTCCAACTCTTTGAAGGATAAGAAACCAGGCAAGAAAGGTCAATTATCACAGCATCAGGTTTCTGTACAATCTCCCACAGCAGATAATATGCCTTCTCGAGCTGTTGGCCGTGGTATATCTGATACTGGAGTTCCCGAACCTATAGGAAATAAAACAAACCATTCTGTGGCAATTACCTCTGAAGATCTACCAACATCTGATATAATATCTAGTAGCATTTCTACTGATGTTGAAGTGAAGACCAATGGGTCTGCAGAAGTTTTTGCTGATGGATCTGGTGCACAAACTCTTGACAGAGTGCACAATCTTAAGCCTGATAAGATAGATGAATTAGCTGAAGATCTGCAGTCTGCTGATCTTCCAGAAACAACATCAAAGCATGTCAAGGATGGCTCAGAGAATGCTGGCGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAACTATATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGAGGAAAAAAAAGAAGCTGTCTTAAGTTCTGAAAGCACTGAAAGTGCTACTACTTCTCGAGGTTTGAAGCAGTTGCCAAAAGATGCTGCTCAGTCAGATGCTATAGCAAGTGAAAAATATGGTCACAGTAAAGCTGAACTTGATGACTGGGAGGATGCCGCTGACATGTCTACTCCCAAACTGGAGGTTCATAATAAATCTCAACAAGTTGGTGATGGAAGTGGAAGTACAACCAAAAAGTATTCCCGTGATTTCCTTCTGAAATTTGCAGAGCAGTGCACTGATCTTCCTGAAATTTTTGAAATCACCACAGACATTGCTGAACCTTTGATGGGTGCCAATATTGGTAATCCTCATGTTTTTGAGCGTGATTTACATCATAGTCCTGGAAGAATTGTAGATAGACCAGGTGGGATGTCTCGGATGGATCGCCGTGGGGATGTTGTAATAGAGGATGACAGATGGAATAAAGTTTCTGGTGGTTTTCGTTCTGGACGTGGTTTGGATGGCATTGGAGGTAATGTGGGATTTCGATCTGGTCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAGGCAGCACTGCAATATGCTGGAGGGATCCTTTCTGGGCCAATGCAATCTGTGGGAAATCAGGGTGGAATGCAAAGAAATCCCCCTGATGGGGAGAGGTGGCAGCGTACTCCTAGTTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACCCAAACTCCTTTACAGATAATGCACAAAGCTGAGAAAAAGTATGAAGTGGGTAATGTGACAGATGTGGAAGGAGTAAAGCAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACTCCTCAGAATTTTGATAGACTTTTTGAACAGGTGAAAGCAGTTAATATTGACAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAACCTACATTTTGTGAAATGTATGCCAACTTCTGTTTACATCTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAGATAACTTTCAAAAGGTTATTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGATGTCTGCTGAGGAAAGGGAAGGAAGAAGAATTAAAGCAAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTGTATAAGAAGAAAATGTTGACGGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAGGAAGATGTTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTCGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCTGCTCAGGAGAGGCAGGCCCAAGCTGGTAGGCCGGGTCGTGGTCTTGGCAACAATCAATCAGCAAGAAGGAATCCCATGGATTTTGGTCCAAGAGGATCATCTGTGCTGTCTTCTCCTAATGCTCAAATGGGTGGACCACGTGGTCTTCCTACTCAAGTTCGTGGGCATCAGGATGCTCGATATGAGGAACGGCAATCTTATGAGGCTAGGACTTTGTCAGTTCCTTTACCTCAAAGACCCTTAGGAGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACAACAATTTCCAATTTGCCAATATCTGATGTGCTTCCTGTCTCTGGAGACTCTCATAGAATGACTACAGGTCTTAATGGTCACAGCAATTTATCAGACCGTGCACCATATAGCTCAAGGGAGGATGTTGTGTCAAGATATGGTACTGATAGGTCTTCCAGTCCATCTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATGTAAACCATGGTAACAAAGACTTGAGGAGTGCAGATCAGAATCTTGACAGACTTGTTGCAACAGTCTCTCAGAATGCCTCTTCAGAGAAGATTTGGTCAGAAGAACGACTGAGGGAAATGTCATTGTCAGCAATCAGAGAATACTACAGTGCTAGAGATGAGAATGAACTTGCTTTATGCATCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCCATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAAAGAGATCTTTTGGCCAAACTGCTTGTCAACCTTGTGAAATCTCAGGATGGCACCTTGAGTCAAGTCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGAATTTTTGCGAAAGTGATAACAGAGAGTGTAGCTACTTTGAATGAGATTGGGCAGTTAATACATGATGGTGGAGAGGAGCAAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCGCGTTGGAGGTAATTCAATCTGAGAAGGGCGACGCTGTTCTAAACGATATCCGTTCAAGCTCTAACCTGCTGTTGGAAACTTTCCGACCACCTAATGCTAAAATCTCCAGGAAGTTGGAAAATTTTATTTAG 5007 0.4404 MSFNQSKPEKNDAVYRRTGRSSSFNQQRGSYGKGGGGGGAGGTAPSVNSLPSTRSFNKKSNNAQGGQSRVNPSPGNSTESNNASAAQTINNGTHVQPQLHGALDGPVTKSSESSAAHRGAGIVPKSPTSLLPPLISDPVPPTSPAKGDASKAFPFQFGSIVPGFINGMAIPARTNSAPPNLDEQKRDQALHDSYKSVPSVPIPPVPKQQQPPKKGAGVTEQSNASETHIGGTKAKRDPQVSPLTPASQMPKPSVVPVTGISMSTPYHQSQAPLQFGGANPQIQSQGMSSVSLQMPVPMPLPIGNATQVQQPVFVPGLQPHPMHPQGIMHQGQNMNFAPQMGHQLPHQLGNMGIGIGPQYPQQQGGKFAGPRKTTPVKITHPETHEELRLDKITDAYSDGGSSGARSHPNIPSQSQPVKSFPASHPGNYYSSSSYNTNSLYYPPSSLPLTSGLVTPNSQPPIFNYPVNHGPQGVSFMSSSSLGSPPINKASTPTGVTTVTIKPSGTSAIVDSSLSNSSISDVQNGESPSSTASSDGSSSVLQKGSETCSEISLQQSKLSSDSVLVMSNNEGGRESLSTSNSLKDKKPGKKGQLSQHQVSVQSPTADNMPSRAVGRGISDTGVPEPIGNKTNHSVAITSEDLPTSDIISSSISTDVEVKTNGSAEVFADGSGAQTLDRVHNLKPDKIDELAEDLQSADLPETTSKHVKDGSENAGGESGTKDRPIIEPNKVKTISKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEAVLSSESTESATTSRGLKQLPKDAAQSDAIASEKYGHSKAELDDWEDAADMSTPKLEVHNKSQQVGDGSGSTTKKYSRDFLLKFAEQCTDLPEIFEITTDIAEPLMGANIGNPHVFERDLHHSPGRIVDRPGGMSRMDRRGDVVIEDDRWNKVSGGFRSGRGLDGIGGNVGFRSGQGGNFGVLRNPRAQAALQYAGGILSGPMQSVGNQGGMQRNPPDGERWQRTPSFQQRGLIPSPTQTPLQIMHKAEKKYEVGNVTDVEGVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKMSAEEREGRRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRPGRGLGNNQSARRNPMDFGPRGSSVLSSPNAQMGGPRGLPTQVRGHQDARYEERQSYEARTLSVPLPQRPLGDDSITLGPQGGLARGMSMRGSTTISNLPISDVLPVSGDSHRMTTGLNGHSNLSDRAPYSSREDVVSRYGTDRSSSPSAYDQSSAPERNVNHGNKDLRSADQNLDRLVATVSQNASSEKIWSEERLREMSLSAIREYYSARDENELALCIKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLVNLVKSQDGTLSQVQLIKGFESVLSTLEDAVNDAPRAAEFLGRIFAKVITESVATLNEIGQLIHDGGEEQGSLLEVGLAADVLGSALEVIQSEKGDAVLNDIRSSSNLLLETFRPPNAKISRKLENFI 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 772 787 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 591 607 - -
Mupr6843g00002 1668 Pfam MIF4G domain 1032 1254 IPR003890 GO:0003723|GO:0005515
Mupr6843g00002 1668 Pfam MA3 domain 1486 1591 IPR003891 -
Mupr6843g00002 1668 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 343 1668 IPR045208 GO:0003743
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 693 725 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 194 273 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 516 553 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 475 499 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 700 714 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 567 629 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1 151 - -
Mupr6843g00002 1668 SUPERFAMILY ARM repeat 1031 1256 IPR016024 -
Mupr6843g00002 1668 FunFam Eukaryotic translation initiation factor 4G 1474 1667 - -
Mupr6843g00002 1668 SMART if4_15 1032 1254 IPR003890 GO:0003723|GO:0005515
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1372 1388 - -
Mupr6843g00002 1668 Gene3D - 1032 1267 - -
Mupr6843g00002 1668 SUPERFAMILY ARM repeat 1476 1666 IPR016024 -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1123 1146 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 257 273 - -
Mupr6843g00002 1668 ProSiteProfiles MI domain profile. 1480 1604 IPR003891 -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 362 424 - -
Mupr6843g00002 1668 Coils Coil 1114 1134 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1396 1413 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 214 229 - -
Mupr6843g00002 1668 SMART ma3_7 1481 1595 IPR003891 -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1425 1445 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1254 1455 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 377 393 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 399 424 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 45 97 - -
Mupr6843g00002 1668 FunFam Eukaryotic translation initiation factor 4G 1032 1267 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1305 1319 - -
Mupr6843g00002 1668 Gene3D - 1473 1668 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 763 806 - -
Mupr6843g00002 1668 MobiDBLite consensus disorder prediction 1254 1278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6843g00002 Mupr-Chr6843 10453 20992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6843g00002 1 1667 Eukaryotic Initiation Factors Gene Family AT3G60240 47.105 0.0 1312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6843g00002 K03260 - gmx:100798562 2707.55