Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6842g00001 ATGGCCATAGCTCCGGCAATAATCCTACAGCCAACTCTGATCATCATCGTCACTTTGCCTGTGATATATTCCATGACAGAAGCTGAGGCTTTGGTGAGCCTCAAAAACTCATTCTCCAACGCCGAAGCTTTGGATGGTTGGGTAGTTGGTTCTATACCTTGCAGTGAAGATGATCAATGGGAGGGTATTTCTTGCAACAATGGCCTTGTCACGGGGCTTCGCCTTGGGGGAATGGGGTTAGTAGGGGAAATACTCGTTGACGCATTGCTTGAACTCAAGGGTCTTCGAACTATTAGCTTTAACAACAACTCTTTCTCGGGTTCAATACCGGAGTTCAACCGAATAGGGTTCTTGAAAGCCATTTATTTGCAAGGGAACAAGTTTTCTGGGGACATTCCTCCTGAATACTTCCAGAGAATGAGGTCTTTGAAGAAACTATGGCTCGCTGATAACCAATTCACGGGGCTTATTCCACCCTCGTTGGCCGAGATGCCTCATCTCATGGAGTTGCATCTTGAGAATAACCAGTTTAGTGGAAGCATTCCTCAAATGAATAACCCATCATTGTTGCAATTCAGTGTTCGCAATAATAAGTTGGAAGGTGAAGTTCCGGCTAGTTTGTGGAAATTCGGTGTGAGTTCGTTTGAAGGGAATCCTGGTGTTTGTGGTGAGAAGTTTGGAAAATCATGTGATTTGGCTTTGGCAAAGGTGAGCCCAAATCCTAGTCCCATTGCTGCACAAAGCAATGTGGGTGATGCGTCTGTGGGATATAGTGGGAATGATAACTCATTCGAGGTTGCTGGGATAATAATAGCGAGTGTAGTGCTTGTCTCACTAGTCGTGTTTTTTATTGTGAGGTCAAAGCGAAAGGAGGAGGAGAATTTTGATATACTTGGACACGAGATTAATGAGGGTGCAGTGGAGGTTCAAGTAACAAGTACTGCACCAGTGAGAAGGGATATGGATGATGCAAGTACAAGTTCAGTAAATAGAAAATCATCATCGTCGAGCAGAAGGGCATCTATGTCTACTCAAAGTAGAAACAACATTGGAGAGCTTGTGATGGTGAATGATGAAAGGGGCGTGTTTGGGTTGCCGGATTTGATGAGAGCAGCCGCGGAAGTTCTGGGAAATGGTGGCTTTGGATCTTCTTACAAGGCCGTCATGGCTAATGGAGTGGCCGTGGTGGTGAAAAGGACTAGAGAGATTAATGGTTTGGAAAGAGATGATTTTGATGCAGAGATGACCAAACTTGCAATGCTTAAACACTGGAATGTATTGGCCCCTTTAGCTTATCATTTCAGAAAGGATGAGAAACTAGTCATCTCTGAGTACGTTCCCAGAGGCAGTCTACTCTTTTCGCTGCATGGTGATAGGGGACCATCGCATGCTGAGCTGGATTGGCCTGCTCGTATGAAGATTGTACGTGGAATTGCGGAAGGGATACGTTATCTTCACACAGAACTTGCTTCGTTCGATCTTCCACATGGAAATCTCAAGTCCAGCAATGTTCTCCTTGGACCAGACAACGAACCAATGCTTGTAGACTACGGGTTTGGCCACATGGTTAATCCTTCTAGCGTTGCACATTTACTATTCGCTTACAAGGCACCAGAAGCAGCACAACATGGCCAAGTTTCACGTAGTTGTGACATTTATTGTCTTGGGATTGTGATACTCGAGATCCTCACGGGAAAATTTCCTTCTCAATATCTTAGTAACGGAAAAGGTGGAACTGATGTGGTGCAATGGGTTCATACCGCGATCTTTGAGGGAAGGGAATCGGAAGTGCTTGATCCTGAAATATCAAACTCAAGGAATTGTCTAGGTGAGATGGGGCAACTCCTCCACGTTGGTGCAGCTTGCACCGAAAGCAACCCTCATTTGAGGTTAGATGTAGTGGAAGCTATTAGAAGGATAGAGGCGATAAGAAGCGAGGGTGTCCAAGAATCAAGAACGATAGAGACCCTCAACAAGGGAGGAGACGTGGAACAAATAGCTTTGGAAGCCAAGATAATTTTGAATTTGGCAGCTCCTAGATTAGAATGTCTTCATGGGATAAACAGGGACGTGTCTTATTTGGTACATACCTTAGAATTTTCAACTTCTAGATCAGGGACAGTCACTGATATAAAAATTTCTACTTCCTCTCGATCCCACAAGTATGGTTGGTTACATCAGACTGGAAAATTTCACAAGCAACTCTCCCCTGCTAAAGACATCACTTGA 2229 0.4455 MAIAPAIILQPTLIIIVTLPVIYSMTEAEALVSLKNSFSNAEALDGWVVGSIPCSEDDQWEGISCNNGLVTGLRLGGMGLVGEILVDALLELKGLRTISFNNNSFSGSIPEFNRIGFLKAIYLQGNKFSGDIPPEYFQRMRSLKKLWLADNQFTGLIPPSLAEMPHLMELHLENNQFSGSIPQMNNPSLLQFSVRNNKLEGEVPASLWKFGVSSFEGNPGVCGEKFGKSCDLALAKVSPNPSPIAAQSNVGDASVGYSGNDNSFEVAGIIIASVVLVSLVVFFIVRSKRKEEENFDILGHEINEGAVEVQVTSTAPVRRDMDDASTSSVNRKSSSSSRRASMSTQSRNNIGELVMVNDERGVFGLPDLMRAAAEVLGNGGFGSSYKAVMANGVAVVVKRTREINGLERDDFDAEMTKLAMLKHWNVLAPLAYHFRKDEKLVISEYVPRGSLLFSLHGDRGPSHAELDWPARMKIVRGIAEGIRYLHTELASFDLPHGNLKSSNVLLGPDNEPMLVDYGFGHMVNPSSVAHLLFAYKAPEAAQHGQVSRSCDIYCLGIVILEILTGKFPSQYLSNGKGGTDVVQWVHTAIFEGRESEVLDPEISNSRNCLGEMGQLLHVGAACTESNPHLRLDVVEAIRRIEAIRSEGVQESRTIETLNKGGDVEQIALEAKIILNLAAPRLECLHGINRDVSYLVHTLEFSTSRSGTVTDIKISTSSRSHKYGWLHQTGKFHKQLSPAKDIT 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6842g00001 742 SUPERFAMILY Protein kinase-like (PK-like) 374 640 IPR011009 -
Mupr6842g00001 742 MobiDBLite consensus disorder prediction 319 345 - -
Mupr6842g00001 742 Gene3D Phosphorylase Kinase; domain 1 337 445 - -
Mupr6842g00001 742 Gene3D Transferase(Phosphotransferase) domain 1 446 662 - -
Mupr6842g00001 742 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Mupr6842g00001 742 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 646 IPR046959 -
Mupr6842g00001 742 MobiDBLite consensus disorder prediction 314 345 - -
Mupr6842g00001 742 Gene3D Ribonuclease Inhibitor 136 240 IPR032675 -
Mupr6842g00001 742 Pfam Protein kinase domain 374 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6842g00001 742 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Mupr6842g00001 742 ProSiteProfiles Protein kinase domain profile. 370 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6842g00001 742 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Mupr6842g00001 742 SUPERFAMILY L domain-like 27 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6842g00001 Mupr-Chr6842 4755 7666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6842g00001 13 643 Receptor kinase-like Gene Family AT3G42880 43.168 2.65e-179 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr6842g00001 Pkinase 5.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6842g00001 - - gmx:100814059 954.125