Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6834g00001 ATGGCTGATCATCAGCAAGGAGATCAACCTTCTTCATCCAAAGGGATCGAAAGAAGGATTATAGAAAAGAACAGGAGAAATCATATGAAGGACCTCTGTTCAGAGCTTAATTCTCTTCTCCCTAACAATAATAATCCCAGGGCATTTTTGTGTACTTATGAACTTCAAGGGGCACTATCACGTGCTGATCAAATAGACACGGCTATAAACTACATCAAGAACCTAGAGACAAAGGTGAAGATGGCGCAGGAGAAGAAACAAAGCTTAATGGAAAGGAAGAAGAGATCTCGTTGTGACAGTTCTGAAGCACCAAAAATTGAGATTCATGAAATGGGTTCCTCGCTTCAAATCATTCTGACGTGTAGGTTTGATAACCACTTCATTTTCAGTGAAACTATTCGCATACTACATGAAGACAACATAGAGATCAAGAGTACCCATTCTTCACTCGCTGGAAACTCAATGTTGCATGTTGTGCACGCACAAACTCGGGAATCCTTTCAACAAGGAACAACGGCAATGAGTATTGAGAGATTGAAAAGACGTAAGGAACTCAATCACTTTGAACTTTGTTCTTATTGCATTCAAATGCATATGCTTAAGCGGCTAAGTTATACCTGA 621 0.3977 MADHQQGDQPSSSKGIERRIIEKNRRNHMKDLCSELNSLLPNNNNPRAFLCTYELQGALSRADQIDTAINYIKNLETKVKMAQEKKQSLMERKKRSRCDSSEAPKIEIHEMGSSLQIILTCRFDNHFIFSETIRILHEDNIEIKSTHSSLAGNSMLHVVHAQTRESFQQGTTAMSIERLKRRKELNHFELCSYCIQMHMLKRLSYT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6834g00001 206 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 75 IPR011598 GO:0046983
Mupr6834g00001 206 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 179 - -
Mupr6834g00001 206 Pfam Helix-loop-helix DNA-binding domain 18 76 IPR011598 GO:0046983
Mupr6834g00001 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 18 92 IPR036638 GO:0046983
Mupr6834g00001 206 SMART finulus 19 81 IPR011598 GO:0046983
Mupr6834g00001 206 Coils Coil 65 99 - -
Mupr6834g00001 206 Gene3D - 15 104 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6834g00001 Mupr-Chr6834 5602 6733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6834g00001 13 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.892 2.61e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6834g00001 HLH 3.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6834g00001 - - pvu:PHAVU_005G102700g 198.749