Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6825g00001 AGCGTTGATCTGAATATAGATCTGATGTGGTGCGGTGCGTCTCAGGTGAAAATGGCGACAGTACCAGGACAGCTGATTTGGGAGATCGTGAAGAGGAACAACTCTTTCTTGGTGAAAGAGTTTGGTAGAGGCACTCAGAGCGTGCAGTTCAGCAGAGAGCCCAACAATCTCTACAACCTCAACACTTATAAGTACTCTGGTTTGGCGAACAAGAAAACTGTGACTGTCCAGGGTGCTGGTAAAGACTTGTTTGTGTTGCTAGCAACAAGCAAGACCAGGAAACAAAATAAGCCTGCTGCCTTGCTTCACAAATCCCTCATGAAGAAGGAGTTCCGCAGGATGGCAAAGGCAGTGCAAAATCAGGTAGCAGATCACTACTACAGGCCAGATCTCAGAAAGGCAGCTCTAGCAAGGTTGAGTGCTGTCAGTAGGAGCCTCAAAATTGCAAAGTCTGGTGTGAAGAAGAGACACAGACAGGTTGCCAAGGCCCCTGTCAAGAAGTGA 504 0.4782 SVDLNIDLMWCGASQVKMATVPGQLIWEIVKRNNSFLVKEFGRGTQSVQFSREPNNLYNLNTYKYSGLANKKTVTVQGAGKDLFVLLATSKTRKQNKPAALLHKSLMKKEFRRMAKAVQNQVADHYYRPDLRKAALARLSAVSRSLKIAKSGVKKRHRQVAKAPVKK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6825g00001 167 Gene3D - 23 151 - -
Mupr6825g00001 167 PANTHER 60S RIBOSOMAL PROTEIN L28 18 162 IPR002672 GO:0003735|GO:0005840|GO:0006412
Mupr6825g00001 167 FunFam 60S ribosomal protein L28 22 150 - -
Mupr6825g00001 167 Pfam Ribosomal L28e protein family 25 145 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6825g00001 Mupr-Chr6825 1642 3700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6825g00001 18 159 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 70.423 4.52e-73 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6825g00001 K02903 - gmx:100500189 257.299