Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6816g00002 ATGGCGGTTCCAGGGAGGCGCAACGGCATCAACGACGACGAAGAGGACTTAGACGACAATGCCCTTTTTGAAGAACAAGGTCTCATCGAAGACGACACCGAAACCCCTCCCCATCTCCGTGACCTTTCCGCCGCCGCTCAGCTCGGCGACCTCCACGCCCTCCGCCTCGCTCTCGATAACTTGACTGGTAGTATTGATGAGCCAGTGGAGGATGGGGATACTGCTCTTCATTTGACTTGTTTATATGGTCATTTGGCTTGTGTCCAGCTGCTTCTAGAAAGAGGAGCAAACATTGAGGCTAAGGATGAAGATGGTGCAATTCCCTTGCATGATGCTTGTGCAGGAGGATTTGCCGAGATAGTTCAACTGCTACTTAACAGAGCTAGTGATGCAGAACATATAAAAAGAATGCTAGAATCAGTTGATTCTGAGGGTGATACTCCTCTCCATCATGCTGCAAGAGGTGAGCATGTTGATGTAATTAGGTTGTTGCTGTCTAATGGTGCATCTTCCAGAAAGGCAAACTTATATGGAAAGACCCCGGCAGATTTACCTGATCAGGACACAGATGCTAGGAGGCTGCTCGAAGCTGCTCTTGTCATGGCATGCCAATATCATTAG 621 0.4879 MAVPGRRNGINDDEEDLDDNALFEEQGLIEDDTETPPHLRDLSAAAQLGDLHALRLALDNLTGSIDEPVEDGDTALHLTCLYGHLACVQLLLERGANIEAKDEDGAIPLHDACAGGFAEIVQLLLNRASDAEHIKRMLESVDSEGDTPLHHAARGEHVDVIRLLLSNGASSRKANLYGKTPADLPDQDTDARRLLEAALVMACQYH 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6816g00002 206 Gene3D - 36 202 IPR036770 -
Mupr6816g00002 206 PANTHER SOWAH (DROSOPHILA) HOMOLOG 35 203 - -
Mupr6816g00002 206 SMART ANK_2a 71 100 IPR002110 GO:0005515
Mupr6816g00002 206 SMART ANK_2a 144 173 IPR002110 GO:0005515
Mupr6816g00002 206 SMART ANK_2a 104 133 IPR002110 GO:0005515
Mupr6816g00002 206 Pfam Ankyrin repeat 71 102 IPR002110 GO:0005515
Mupr6816g00002 206 ProSiteProfiles Ankyrin repeat profile. 144 176 IPR002110 GO:0005515
Mupr6816g00002 206 FunFam BRCA1-associated RING domain protein 1 36 203 - -
Mupr6816g00002 206 ProSiteProfiles Ankyrin repeat region circular profile. 104 130 - -
Mupr6816g00002 206 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Mupr6816g00002 206 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Mupr6816g00002 206 ProSiteProfiles Ankyrin repeat profile. 104 136 IPR002110 GO:0005515
Mupr6816g00002 206 ProSiteProfiles Ankyrin repeat region circular profile. 144 170 - -
Mupr6816g00002 206 SUPERFAMILY Ankyrin repeat 42 184 IPR036770 -
Mupr6816g00002 206 Pfam Ankyrin repeats (3 copies) 104 170 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6816g00002 64 187 Ion Channels AT2G25600 31.373 8.40e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6816g00002 - - gmx:100527544 369.392