Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6804g00007 ATGTGTGACAGTGTGTCTTGTTCCAAAAGCAGACCCACTCCTCTGAGAGAAGTCAGAGGACAGTCCAGAGAGGGGTTAGCATCACGTTGTTGCCTCGTGCTGTTGTGTACAGCGACAATTATCTCCAACTGTTTGAAGCCAATTTCACGCATGAGGTTCCAATTCAATGCCCAAGTTACTCATGCCAAGGATTTGGCTTTTGAATTTGTGAGCTTCAAGTACAGCACCGTTGGTTTTGGGGCAACTCATCCAACCATGATTGAAGTCTGGCTCTTGGCTTTAATGGTTCTCTCCAATGGGTTCTCTTCAACTGGGGCTGGCATGCATAATTCTACAGCACCAGATTTTGTAAATATTGGGGCTCTCTTCTCTTTCAATACAAGTGTTGGTAGAACTATACAAATTGCTATAAAAGCTGCGGTTGAAGATGTAAATTCCGATCCAAACATTCTTGGTAAAACCAAGCTGAACCTCTCACTGCAAGAAGATTCTAAGTATAGAGGTTTCCTGAGCATTGCTGAGGTTTTGCAGGTCATCGCAAGACGCACGGTGGCAATAATAGGCCCCCATAGCTCTGTAACAGCTCATGTCATAACTCATATTGCAAACGAGCTCCAAGTTCCTTTGCTGTCATTTTCAGCTTTGGACCCTACCCTTTCTTCACTTCAATTCCCATTCTTCATTAGAACTTGTCATAGTGATCTTTATCAAATGACTGCAATAGCAGACCTTGTTGACTACTATGGTTGGAAAGATGTTATTGCTGTCTACATTGATGATGATAACGGGAGAAATGGAATTGGCGCATTAGGTGATAAGCTTGCTGAGAAGCGCTGCAGGATATCATTTAAAGCACCTTTGAGCCCCCAAGCATCTATGGAAGAGATTACTAATGTGCTTGTTCAGGTGGCTCTGGCAGAATCACGGGTAATAGTTGTTCATGCCAATACTCAATGGGGTCCCAAGGTGTTTACTGTTGCAAAGAATATTGGTATGATGGGAACTGGGTATGTCTGGATAGCCACTGCTTTCCTCTCTGCTCTTCTTGATATCAATAATCCCCTCCCTTCAGATGCAATGGATGAAATTCAAGGAGTTCTTACGCCGCGAATCTACACGCCAGATACAAAGCTCAAAAGAAGGTTTGTTTCTAAGTGGAAAAACTTGACTAGTGGAAATACTGCTAATGTCCACCTTGGATTGAGTTTTTTAGCTCTCTATGCATATGACACTGTTTATGCGCTTGCTCATGCACTTGATGCATTTTTCAAACAAGGTAACCAAATTACATTCTCAACTGATTCAAAGCTATCTAGCATACATGGAGATAACTTGCATCTAGATGCTTTGAAAATCTTTAATGAAGGAAATTTGTTACGTAGTAACATTTATGAGGTTAACCTGTCCGGTGTATCAGGTCGGTTCAAGTATGCATCTGATAGAAACCTTGTTAATCCTGCATATGAAATCATTAATGTGGTTGGAACAGGAACTCGGAGGATCGGTTATTGGTCTAATTACTCTGGATTATCAGTTGTTCCTCCTACAGAAGCTCTTTATTCCAAAACACCTAATCTTTCCAGGGAAAATCAAAAGTTGTTCCCTGTGATTTGGCCTGGAAACACAGACCAGAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGCTCTTAAAAATTGGAGTACCAAAAGGTGTTAGTTACCGACAATTTGTCTCACAAACAAAAGGCACTGATATGTTTGAGGGATTCTGCATTGATGTATTTCTTGCTGCAGTGAACCTGTTGCCTTATGCTGTCCCCTATAAGTTCATTGCATATGGGGATGGTAAGAACAATCCTAGTATGACTGAGCTTACCCGTCTGATCACAACGGGTGAGTTTGATGGTGCAGTAGGTGACATTGCAATTACTACAGAAAGAACAAGGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTTTGGTTGTAGTAGCACCAGTTAGAAGGGCAGAATCCAATGCTTTGGCCTTCTTGGCCCCATTTACACCAAAGATGTGGTGTGTCACTGCTGTTTTTTTCATATTAGTGGGAGCTGTTGTTTGGATTTTGGAGCATAGGGTCAATGATGAATTTAGGGGACCACCCAAAAAACAAGTAGTTACTATTTTATGGTTTAGTTTTTCAACAATGTTCTTTTCCCACAGGGAAAATACAGTGAGCACACTTGGTCGCTTTGTGTTGATTATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTACACGGCAAGTCTAACCTCAATCCTCACAGTGCAACAGCTTTATTCACCCATTAAAGGCATTGAAAGTTTAGCAAATAGCAAAGACCCTATTGGGTACACGCAGGGTTCTTTTGCTGGAAATTATTTAGTTCAGGAAATTGGTATTGATGAGTCCCGGCTTGTTCCTCTAACAACACCAGATGAAACTGCTAAAGCTCTGAGAGACGGTCCCCAAAATGGGGGTATTGCTGCTTATATTGACGAGCATCCCTACACTGATCTCTTCCTCTCCAGCCGTTGTGATTTAACTGTTGTAGGTCAAGAGTTCACCAGAAACGGTTGGGGATTTGCCTTTCCACGAGACTCGCCATTAGCAGTTGACATGTCAACTGCCATATTGCAAATGGTAGATAATGGAGATTTACAAAGGATACATGACAAATGGCTTTTGAGTAGTGCTTGTTTATCACAAGGTGCCAAGCTTGAAGTGGAAAGACTCCAACTCAAAAGCTTTTGGGGCCTCTATGTGATATGTGGGATTGCCTGCTTGCTTGCACTCTTCATATATCTTATACAGATTTTTAGGCAATACCACAAGCACCACTCAGAGGAACTTGAGTACACTGACGGCCAAAGCTCAGGATCAAGATCTTCAGGTCTTAAGACTTTCCTTTCATTTGTAGATGAAAAAGAAGAGACTATTAAGAGCCGGTCCAAGAGAAGGAAAATGGAGAGAATCTCATACAGAAGCAGCGAGGGAAGTTCATCCATCTCCAATAAGGGATATGCTTCACGCAGAAGTGAATGTGCTAGCGAATTACATGAAATTGTTTACTCCTTGCCATCTACTGTCATGATAAGTTAA 3111 0.4159 MCDSVSCSKSRPTPLREVRGQSREGLASRCCLVLLCTATIISNCLKPISRMRFQFNAQVTHAKDLAFEFVSFKYSTVGFGATHPTMIEVWLLALMVLSNGFSSTGAGMHNSTAPDFVNIGALFSFNTSVGRTIQIAIKAAVEDVNSDPNILGKTKLNLSLQEDSKYRGFLSIAEVLQVIARRTVAIIGPHSSVTAHVITHIANELQVPLLSFSALDPTLSSLQFPFFIRTCHSDLYQMTAIADLVDYYGWKDVIAVYIDDDNGRNGIGALGDKLAEKRCRISFKAPLSPQASMEEITNVLVQVALAESRVIVVHANTQWGPKVFTVAKNIGMMGTGYVWIATAFLSALLDINNPLPSDAMDEIQGVLTPRIYTPDTKLKRRFVSKWKNLTSGNTANVHLGLSFLALYAYDTVYALAHALDAFFKQGNQITFSTDSKLSSIHGDNLHLDALKIFNEGNLLRSNIYEVNLSGVSGRFKYASDRNLVNPAYEIINVVGTGTRRIGYWSNYSGLSVVPPTEALYSKTPNLSRENQKLFPVIWPGNTDQKPRGWVFPNNGRLLKIGVPKGVSYRQFVSQTKGTDMFEGFCIDVFLAAVNLLPYAVPYKFIAYGDGKNNPSMTELTRLITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPVRRAESNALAFLAPFTPKMWCVTAVFFILVGAVVWILEHRVNDEFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLYSPIKGIESLANSKDPIGYTQGSFAGNYLVQEIGIDESRLVPLTTPDETAKALRDGPQNGGIAAYIDEHPYTDLFLSSRCDLTVVGQEFTRNGWGFAFPRDSPLAVDMSTAILQMVDNGDLQRIHDKWLLSSACLSQGAKLEVERLQLKSFWGLYVICGIACLLALFIYLIQIFRQYHKHHSEELEYTDGQSSGSRSSGLKTFLSFVDEKEETIKSRSKRRKMERISYRSSEGSSSISNKGYASRRSECASELHEIVYSLPSTVMIS 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6804g00007 1036 PIRSF IGluLR_plant 84 1022 IPR017103 -
Mupr6804g00007 1036 Gene3D - 233 510 - -
Mupr6804g00007 1036 Gene3D - 669 796 - -
Mupr6804g00007 1036 MobiDBLite consensus disorder prediction 984 1009 - -
Mupr6804g00007 1036 Pfam Ligand-gated ion channel 899 931 IPR001320 GO:0015276|GO:0016020
Mupr6804g00007 1036 Pfam Bacterial extracellular solute-binding proteins, family 3 570 898 IPR001638 -
Mupr6804g00007 1036 FunFam Glutamate receptor 795 902 - -
Mupr6804g00007 1036 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 117 976 IPR015683 -
Mupr6804g00007 1036 Gene3D - 551 668 - -
Mupr6804g00007 1036 CDD GluR_Plant 558 898 - -
Mupr6804g00007 1036 FunFam Glutamate receptor 233 390 - -
Mupr6804g00007 1036 Pfam Receptor family ligand binding region 134 495 IPR001828 -
Mupr6804g00007 1036 FunFam Glutamate receptor 669 799 - -
Mupr6804g00007 1036 FunFam Glutamate receptor 553 669 - -
Mupr6804g00007 1036 SMART GluR_14 559 900 IPR001320 GO:0015276|GO:0016020
Mupr6804g00007 1036 Gene3D - 135 485 - -
Mupr6804g00007 1036 SUPERFAMILY Periplasmic binding protein-like I 113 550 IPR028082 -
Mupr6804g00007 1036 CDD PBP1_GABAb_receptor_plant 118 514 IPR044440 -
Mupr6804g00007 1036 Gene3D - 846 905 - -
Mupr6804g00007 1036 SUPERFAMILY Periplasmic binding protein-like II 535 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6804g00007 Mupr-Chr6804 15102 20158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6804g00007 90 1000 Ion Channels AT3G51480 58.114 0.0 1120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6804g00007 K05387 - gmx:100793320 1650.57