Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6795g00002 ATGATCAATTTTGAAGAAACCGAGTTGCGACTCGGGCTGCCACTGAATGGAAACGAGGGCGAGTTCACTCTCAAAAACACTTGCTCTGGTGCCTTGAACGGGAAGAGGGTATTTTCGGATGCAAGCAGTGGTAGCGTCGATTTAAAGCTAAACCTTTCCTCAACCTCAAATAATGTTCTTCCCTCTGCCTCTTCTGACGTCGCTAAACAGAACACCACTGCTTCTGCTGCACCTCCTCCTGCTCGCTCTAACGACCCAGCCAAGCCACCCGCAAAGGCACAAGTGGTGGGTTGGCCACCAGTGCGGTCATTCAGAAAGAACATTGTGAATAACAACATTCAAAGGAGTAACAAGAATGAAACAGAAAAAGGTGCCACGAGTAGTAGCAACAATGGGAACATGGGAGCAGCTTTCGTGAAAGTGAGCATGGATGGTGCTCCCTATCTACGCAAGGTGGATTTGAAGTTGTATAAGAGCTACCAAGAGCTGTCGGATGCTCTGGCTAAAATGTTCAGTTCATTCACCATTGACAAGTGTGGATCCCAAGGAATGAAAGACTTCATGAACGAGAGCAAATTGATTGATCTTCTCAACGGCTCTGATTACGTACCAACCTATGAAGACAAAGATGGAGACTGGATGCTCGTGGGTGACGTACCCTGGGAAATGTTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGAGGCAATCGGGCTAGCACCAAGAGCAGTGGAAAAGTGCAAGAACAGAAGCTGA 765 0.4758 MINFEETELRLGLPLNGNEGEFTLKNTCSGALNGKRVFSDASSGSVDLKLNLSSTSNNVLPSASSDVAKQNTTASAAPPPARSNDPAKPPAKAQVVGWPPVRSFRKNIVNNNIQRSNKNETEKGATSSSNNGNMGAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDKCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6795g00002 254 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 241 IPR003311 GO:0005634|GO:0006355
Mupr6795g00002 254 Gene3D - 130 248 - -
Mupr6795g00002 254 MobiDBLite consensus disorder prediction 109 129 - -
Mupr6795g00002 254 FunFam Auxin-responsive protein 131 246 - -
Mupr6795g00002 254 SUPERFAMILY CAD & PB1 domains 128 235 - -
Mupr6795g00002 254 ProSiteProfiles PB1 domain profile. 136 236 IPR000270 GO:0005515
Mupr6795g00002 254 Pfam AUX/IAA family 6 245 IPR033389 -
Mupr6795g00002 254 MobiDBLite consensus disorder prediction 60 79 - -
Mupr6795g00002 254 MobiDBLite consensus disorder prediction 60 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6795g00002 Mupr-Chr6795 8780 10820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6795g00002 83 239 B3 DNA Binding Superfamily AT3G61830 30.573 2.89e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr6795g00002 AUX_IAA 4e-87 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6795g00002 K14484 - gmx:100796888 394.045