Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6793g00002 ATGGGAAATTGCTGGGGTTCTCCGCCTCACAACCCAACCCCAACAACTACCGGTAACCTTAGTACAGCTACACCGGGGTCATCTCAGACCATCAGCAGCAACTATACTACTACTCCGACTGCTACTTCTTCTGGAAGTGGGAGCAGCTCCATACATAGCAATTTCGCGGTGTCAAGCGGTGATCAACCTTATCTAATTGGACAGATCTTACCTACCTCTAGTTTGAGGATCTTCACTTTTGCCGAGTTGAAGGTTGCAACTAGGAATTTCAGAGCTGATACAGTGCTTGGGGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGATGAGAAGACCACGTCAAAGGCTGGAACTGGAACAGTCGTTGCCGTCAAAAAACTTAACTCCGAAAGCTTACAAGGACTTGAGGAGTGGCAGTCCGAAGTAAATTTTCTAGGACGGCTTTCTCATCCTAATCTTGTTAAGCTGTTGGGATACTGTTTGGAGGAGACAGAGCTTCTTCTCGTCTATGAATTCATGCAGAAGGGCAGTTTGGAAAACCATCTATTTGGAAGGGGCTCTGCTGTTCAACCACTTCCTTGGGACATCAGGCTTAAGATAGCAATTGGGGCAGCTCGTGGCCTTGCATTCTTGCATACATCTGAAAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTTGATGGGTCCTACAACGCAAAGATATCAGACTTCGGCTTGGCAAAACTTGGTCCTTCAGCTAGTCAATCCCATGTGACAACAAGAGTGATGGGCACATACGGTTATGCGGCTCCTGAATATATGGCCACAGGGCATCTATATGTAAAAAGTGATGTATATGGGTTTGGAGTGGTTTTGGTTGAGATACTGACAGGCCAACGAGCACTTGATCAGAACCGTCCAAGTGGGCAACATAATCTAACAGAGTGGGTCAAACCATATCTGCATGACAGAAGAAAATTGAAGAACATTATGGATTCTCGATTGGAAGGAAAATATCCATCGAAAGCTGCATTTCGTATAGCTCAGCTTGCTTTGAAATGTCTTGCACCTGAGCCCAAACAGCGGCCATCAATGAAGGAAGTTTTGGAGAATTTGGAGCGAATTCAAGCTGCCAATGAGAAACCTATGGAGCCTAAATTCCGCTCTACTCATCATACCCGTCAAGGTCACCAGGCTGTGCACCATCGTTCTCCACTTCAGGATGGTAGTAGTCACTAG 1230 0.4577 MGNCWGSPPHNPTPTTTGNLSTATPGSSQTISSNYTTTPTATSSGSGSSSIHSNFAVSSGDQPYLIGQILPTSSLRIFTFAELKVATRNFRADTVLGEGGFGKVFKGWLDEKTTSKAGTGTVVAVKKLNSESLQGLEEWQSEVNFLGRLSHPNLVKLLGYCLEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLVEILTGQRALDQNRPSGQHNLTEWVKPYLHDRRKLKNIMDSRLEGKYPSKAAFRIAQLALKCLAPEPKQRPSMKEVLENLERIQAANEKPMEPKFRSTHHTRQGHQAVHHRSPLQDGSSH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6793g00002 409 Pfam Protein tyrosine and serine/threonine kinase 93 369 IPR001245 GO:0004672|GO:0006468
Mupr6793g00002 409 FunFam Serine/threonine-protein kinase BIK1 57 173 - -
Mupr6793g00002 409 FunFam Serine/threonine-protein kinase PBS1 174 388 - -
Mupr6793g00002 409 PANTHER OS01G0588500 PROTEIN-RELATED 41 373 - -
Mupr6793g00002 409 ProSitePatterns Protein kinases ATP-binding region signature. 96 127 IPR017441 GO:0005524
Mupr6793g00002 409 MobiDBLite consensus disorder prediction 372 409 - -
Mupr6793g00002 409 ProSiteProfiles Protein kinase domain profile. 90 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6793g00002 409 SUPERFAMILY Protein kinase-like (PK-like) 63 369 IPR011009 -
Mupr6793g00002 409 MobiDBLite consensus disorder prediction 1 51 - -
Mupr6793g00002 409 Gene3D Phosphorylase Kinase; domain 1 74 173 - -
Mupr6793g00002 409 Gene3D Transferase(Phosphotransferase) domain 1 174 395 - -
Mupr6793g00002 409 MobiDBLite consensus disorder prediction 372 388 - -
Mupr6793g00002 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Mupr6793g00002 409 CDD STKc_IRAK 96 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6793g00002 Mupr-Chr6793 6732 9356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6793g00002 73 391 Receptor kinase-like Gene Family AT4G02010 49.845 7.72e-105 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr6793g00002 PK_Tyr_Ser-Thr 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6793g00002 - - gmx:100305417 712.22