Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6792g00003 ATGGACGATCCTGAAACCAAAGAAAGAATCGAAGAAACTGTTCGCAGGATTTTACAAGAATCCGACATGGACGAGGTTACTGAGTCTAAGATTCGAAAGCAGGCATCCCAAGAGCTTGGCCTCGACCTATCTCAGACCCATTTCAAAGCCTTCGTGAAACAGGTGGTGAAGGCTTTTCTCCAAGAGAAGCAAGAAGAAGAAGAACAACAACAACAACAAGATGAAAACCATGAAGAGGAAGAGGAAGAAGAAGAACAAGGAGTTTCTAAGGGCAAGGAGTACGATGATGAAGGCGATCTCATCATTTGCAAGCTGTCAGATAAGAGAAGGGTGACGATTCAGGATTTCAGAGGGAAGACATTGGTCTCCATGCGGGAGTATTATAAAAAGGATGGCAAGGAACTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGTCCGCCTTCAAGAAAAATGTGCCTGCCATAGAAAAAGCCATTAAGAAAATGGAGTCACGCAACATACATGTGAGCCAAGGAGTCATGTCCAGACACCAGATGCAGTCCAACTGGTCTTGTCAACCAGCACATGGACCTGATACCCCTATGTCTTCAATTCAAACCACTTAA 615 0.4439 MDDPETKERIEETVRRILQESDMDEVTESKIRKQASQELGLDLSQTHFKAFVKQVVKAFLQEKQEEEEQQQQQDENHEEEEEEEEQGVSKGKEYDDEGDLIICKLSDKRRVTIQDFRGKTLVSMREYYKKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMESRNIHVSQGVMSRHQMQSNWSCQPAHGPDTPMSSIQTT 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6792g00003 204 Pfam DEK C terminal domain 5 60 IPR014876 -
Mupr6792g00003 204 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 168 IPR045125 GO:0003713|GO:0060261
Mupr6792g00003 204 MobiDBLite consensus disorder prediction 68 86 - -
Mupr6792g00003 204 FunFam RNA polymerase II transcriptional coactivator KELP 92 168 - -
Mupr6792g00003 204 MobiDBLite consensus disorder prediction 63 93 - -
Mupr6792g00003 204 Pfam Transcriptional Coactivator p15 (PC4) 103 154 IPR003173 GO:0003677|GO:0006355
Mupr6792g00003 204 Gene3D - 1 63 - -
Mupr6792g00003 204 Coils Coil 56 86 - -
Mupr6792g00003 204 MobiDBLite consensus disorder prediction 176 204 - -
Mupr6792g00003 204 PIRSF RNA_polymII_KELP 1 169 IPR017415 -
Mupr6792g00003 204 SUPERFAMILY ssDNA-binding transcriptional regulator domain 102 164 IPR009044 GO:0003677|GO:0006355
Mupr6792g00003 204 Gene3D Transcriptional Coactivator Pc4; Chain A 91 169 IPR009044 GO:0003677|GO:0006355
Mupr6792g00003 204 MobiDBLite consensus disorder prediction 1 31 - -
Mupr6792g00003 204 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Mupr6792g00003 204 SUPERFAMILY DEK C-terminal domain 2 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6792g00003 Mupr-Chr6792 20132 22979 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Mupr6792g00003 DEK_C 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6792g00003 K25815 - gmx:100305633 253.832