Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6785g00001 ATGGACTGTGGTTGCAATTGTGGCTGCAACAATTATTATGGTCATCTTGATTGTTGGTACACTTTGGTGGAGAGTTTGCCTAAGGAAAAAAAATTCATTAGCAAAAGATCTCATTTTGGTATGCTTCTATCGGCAGAGCTTAAGCGTTTAGATTTTCAGACTAGTTTATTTACCTTGCGTCAAATTAAAGCAGCAACAAATAGCTTTGATATTTCTAATAAGATTGGAGAAGGAGGGTTTGGCCCAGTTTATAAGGGTACTTTGTCAGATGGCACAATAATAGCTGTTAAACAGCTTTCGTCTAAATCAAAACAAGGAAACCGTGAGTTCATCAATGAGGTTGGCATGATCTCAGCTTTGCAACACCCTTGTCTTGTTAAACTTTATGGTTGTTGTGTTGAGGAAGATCAACTGTTGTTGGTATATGAATATATGGAAAACAATAATCTTGCACAAGCCTTATTCGTAAATTGTTGTCTAATTTTTGTAATATTCACAAACAAAGGCCCAAAAGAATGTTGCTTAAGATTGAATTGGCCAACAAGACAGAAGATATGTGTTGGTGTTGCTAGAGGTTTAGCTTTCCTACACGAAGAATCAAGATTGAAAATTGTTCACAGAGACATCAAGGCCACTAATGTGTTGCTTGACAAAGACCTAAACCCAAAAATATCTGATTTTGGTGTAGCCAAGCTTGATGAGGAAGGAAATACTCATATAAGCACCAAAATAGCAGGGACCATTGGATACATGGCTCCTGAATATGCAATGCATGGTCATTTGACCGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTATTAGTGGAAGGAGCAATACCATTCATCAGGCAAAGGATGAAGCTCTATACCTTCTTAATTGGGTGCATCTATTGAGAGAGAAAGGCAACCTAATGGAGCTAGTTGATCCAAAGTTAGGTTTGGATTTCAATAAAGAAGAGGTGATGGTAATGATCAAAGTGGCTCTCCTATGTACCCATGTCACTTCATCCCTAAGACCCACAATGTCTTCTGTGTTAAGCATGCTTGAGGGAAAAACTAAGGTTCCAGAATTTGATTCAAATCCAAATGAGGTGATGGATCTTCAGACAAAGATGAAAGCAATGCGACAACATTACTATCAGATAGAAGAAAATAAACTGAATGAGACACAAAGCTCAAGTGTGTCAACTGATGGACCATGGATTACTTCAGCTTCAACAACAGACCTTTACCCTCCCCACCTTGATTCTTCTTACTAG 1272 0.3805 MDCGCNCGCNNYYGHLDCWYTLVESLPKEKKFISKRSHFGMLLSAELKRLDFQTSLFTLRQIKAATNSFDISNKIGEGGFGPVYKGTLSDGTIIAVKQLSSKSKQGNREFINEVGMISALQHPCLVKLYGCCVEEDQLLLVYEYMENNNLAQALFVNCCLIFVIFTNKGPKECCLRLNWPTRQKICVGVARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGVAKLDEEGNTHISTKIAGTIGYMAPEYAMHGHLTDKADVYSFGIVALEIISGRSNTIHQAKDEALYLLNWVHLLREKGNLMELVDPKLGLDFNKEEVMVMIKVALLCTHVTSSLRPTMSSVLSMLEGKTKVPEFDSNPNEVMDLQTKMKAMRQHYYQIEENKLNETQSSSVSTDGPWITSASTTDLYPPHLDSSY 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6785g00001 423 FunFam Putative LRR receptor-like serine/threonine-protein kinase 145 365 - -
Mupr6785g00001 423 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 43 393 - -
Mupr6785g00001 423 Gene3D Phosphorylase Kinase; domain 1 33 144 - -
Mupr6785g00001 423 MobiDBLite consensus disorder prediction 392 411 - -
Mupr6785g00001 423 Pfam Protein tyrosine and serine/threonine kinase 71 351 IPR001245 GO:0004672|GO:0006468
Mupr6785g00001 423 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 40 144 - -
Mupr6785g00001 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mupr6785g00001 423 CDD STKc_IRAK 75 355 - -
Mupr6785g00001 423 SUPERFAMILY Protein kinase-like (PK-like) 53 375 IPR011009 -
Mupr6785g00001 423 Gene3D Transferase(Phosphotransferase) domain 1 145 378 - -
Mupr6785g00001 423 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6785g00001 423 ProSiteProfiles Protein kinase domain profile. 69 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6785g00001 Mupr-Chr6785 4201 6391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6785g00001 43 411 Receptor kinase-like Gene Family AT1G07650 61.351 2.53e-157 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr6785g00001 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6785g00001 - - gmx:100785451 573.163