Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr677g00004 ATGGATCCGGGTGCGATGATGAACGAGGGTTCCTTTGCGAATAATGGGAGCGGCAATACGGCGCCGTATAGCTTGGCGGAGATCTGGCAGTTCCCGCAGGGGATTAACGGCGGCGGGGGATTGGGACTCAGAACGCCGCAGTTCGGACACGGGCCAGCCCAGTTTGGGGATTTCGCTCCCGGGCCCACCCACGGGCTTGGGCCCAGTAGTAGTAGGAAGAGGCGCGACTCCGAGGACGATTCCGCTAAGGGCGTGTCCACCAGCAATGCCGTGAATGAGGGTGACGGAAAACGTGTTAAAGCGACGGGGGATAGGAACGAGGGTGGTGATGGCAAAGGTGAAGCAGAAGTCAGTTCAGGAAAGCCTGCGGAGCAAAGTGCCAAGCCACCTTCCGAACCTGCGAAGCAAGATTACATTCACGTCCGAGCCAGAAGGGGTCAAGCCACTGATAGCCACAGTCTTGCAGAGCGAGCTAGAAGGGAAAAAATTAGTGAAAGGATGAAAATTCTTCAGGATTTGGTCCCGGGTTGTAATAAGGTTATTGGGAAAGCATTGGTCCTTGATGAAATAATTAATTATATCCAATCTCTTCAGCGCCAAGTTGAGTTTTTGTCAATGAAACTTGAAGCAGTGAATTCAAGACTGAACTCTGGTATTGAAGCGTTTCCTCCTAAAGATTTTGGTCAGCAAACATTTGATCCAGCTGGCGTACCATTCGGATCACAAGCACCAAGAGAGTATAGCAGAGGTTCTTCACCAGAGTGGTTACATATGCAGGTAGGAGGTGGTTTTGAAAGAACAACGTAG 807 0.5118 MDPGAMMNEGSFANNGSGNTAPYSLAEIWQFPQGINGGGGLGLRTPQFGHGPAQFGDFAPGPTHGLGPSSSRKRRDSEDDSAKGVSTSNAVNEGDGKRVKATGDRNEGGDGKGEAEVSSGKPAEQSAKPPSEPAKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDFGQQTFDPAGVPFGSQAPREYSRGSSPEWLHMQVGGGFERTT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr677g00004 268 SMART finulus 153 203 IPR011598 GO:0046983
Mupr677g00004 268 CDD bHLH_AtBPE_like 137 222 - -
Mupr677g00004 268 Coils Coil 194 214 - -
Mupr677g00004 268 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 238 IPR024097 GO:0006355
Mupr677g00004 268 Gene3D - 144 220 IPR036638 GO:0046983
Mupr677g00004 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 214 IPR036638 GO:0046983
Mupr677g00004 268 Pfam Helix-loop-helix DNA-binding domain 151 198 IPR011598 GO:0046983
Mupr677g00004 268 FunFam Basic helix-loop-helix transcription factor 144 216 - -
Mupr677g00004 268 MobiDBLite consensus disorder prediction 10 26 - -
Mupr677g00004 268 MobiDBLite consensus disorder prediction 97 114 - -
Mupr677g00004 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 197 IPR011598 GO:0046983
Mupr677g00004 268 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr677g00004 Mupr-Chr677 7116 10278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr677g00004 1 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 61.826 1.91e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr677g00004 HLH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr677g00004 - - gmx:100784478 467.233