Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6751g00004 ATGTCTGTTCTCCCTTTCTCTCAATTCTTCTCTGCTCTTCCCAACTCAACCAAAGCTTTCAACTTTAAACTTCTTCTGAATCCAAATACCCCTTTCTCTTTCCAACACAAACTCTCTTTCTGCTTCGTTTTTTGGTTTTCTTTTATCATGGGTCGCCCACCTAGTAATGGAGGCCCAGCCTTTCGCTTCACTCAGGCTGAGGTAGCAGAAATGGAAGCTATTCTTCAAGAGCACAACAATGCAATGCCAGCACGTGATGTTCTTACAACTCTTGCAGAGAAGTTCAGTGAATCACCAGATCGTAAAGGCAAGATTACAGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAATAAGCGGTATGCAATACGAGCAAAATCAAGTAAGACTCCTGGGAAGTTAAATATTACACCTATGCCTCGGGATGATTCAACACCAGTAAGGAGTATGCCTCAACAACCAACAGCTGCTCCAATTCCCGCTGCTTCTGCTTCAGTTCCAACAGCAGTAAAAGCAACTCCAGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGGAAGGGATGGAGCATGGTATGATGTGGCTACCTTTCTATCACACAGATATTTGGAGACCAGTGATCCGGAAGTGCTGGTACGATTTGCTGGTTTTGGACCTGAGGAAGATGAGTGGATTAACATTCGAAAGCATGTCAGGCCACGATCTTTGCCATGTGAATCATCAGAATGTGTTGTAGTCATCCCTGGCGATCTCATACTTTGTTTTCAGGAAGGTAAGGAGCAAGCCCTTTACTTTGATGCCCATGTCCTTGATGCTCAAAGACGTAGGCATGATGTACGAGGCTGTCGATGTAGATTTTTGGTTCGTTATGATCATGATCAGTCGGAGGAAATCGTGCCGCTTAGGAAGATTTGTCGCAGGCCCGAAACCGATTACCGGTTACAGCAACTTCATGCTGTGAATGAGGCAGCACCTGTGGATCAGCAAAAGAGTAGCATGGATCCAGCAGCAAATGTTAATGCCATGAGGACTACTACTGAAACAGTGCCAAAGCAGCTAATTACAGCAAACATTCATATGGAGACACCAGTTATACAAACAAATGTTCCTCTACCTCCACAAAGTATGGATGTGGATCAAGCGAAAGCTGAAACAAGTACTGATGTTCAAGCAGGCAATTCCATCATCCCCCAAGGCAATGCATTTACTAACATCATTACTTCAAGCAGTGTTCCTGAAGTCTCTAGTCAGACTCAGAACATGGTTGAAGATTGA 1275 0.4361 MSVLPFSQFFSALPNSTKAFNFKLLLNPNTPFSFQHKLSFCFVFWFSFIMGRPPSNGGPAFRFTQAEVAEMEAILQEHNNAMPARDVLTTLAEKFSESPDRKGKITVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDSTPVRSMPQQPTAAPIPAASASVPTAVKATPENSVMEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINIRKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPVDQQKSSMDPAANVNAMRTTTETVPKQLITANIHMETPVIQTNVPLPPQSMDVDQAKAETSTDVQAGNSIIPQGNAFTNIITSSSVPEVSSQTQNMVED 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6751g00004 424 CDD homeodomain 62 124 IPR001356 GO:0003677
Mupr6751g00004 424 Gene3D - 238 310 - -
Mupr6751g00004 424 Gene3D - 176 237 - -
Mupr6751g00004 424 SMART HOX_1 56 130 IPR001356 GO:0003677
Mupr6751g00004 424 Gene3D - 59 133 - -
Mupr6751g00004 424 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 50 390 IPR039276 -
Mupr6751g00004 424 ProSiteProfiles 'Homeobox' domain profile. 62 126 IPR001356 GO:0003677
Mupr6751g00004 424 MobiDBLite consensus disorder prediction 131 167 - -
Mupr6751g00004 424 Pfam SAWADEE domain 179 305 IPR032001 GO:0003682
Mupr6751g00004 424 SUPERFAMILY Homeodomain-like 53 125 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6751g00004 Mupr-Chr6751 15955 23687 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr6751g00004 SAWADEE 8.1e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6751g00004 - - gmx:100783895 654.055