Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6741g00007 ATGTTGAACCGCGCGTCAAATGTTTCGGCCGAAGCAGTGGTTGGTTCGGGCGAGAGTGGGGATGAGCTGTATGAACAACTATGGAAGGCTTGTGCGGGACCACTGGTGGATGTTCCTCGTGTTGGCCAGAGAGTCTTCTATTTTCCTCAAGGCCACATGGAGCAATTAGAGGCTTCAACCAACCAGGAACTGAATCAGAGGATTCCTCTGCTGAAGCTTCCCACGAAGATCCTTTGTGGCGTCGTGAATGTTCATTTACTGGCTGAGCAAGAAACGGATGAGGTTTATGCGCAGATCACTTTGGTGCCGGAATCTAATCAAGATGAGCCTACAAGCACTGATCCGTGCACTCCTGAACCTCCAAGGGCACCTGTTCACTCTTTCTGCAAGGTCTTGACTGCTTCAGATACCAGCACCCATGGTGGCTTCTCTGTTCTCAGGAAACATGCCACGGAATGCCTTCCTGCGTTGGACATGTCCCAACCGACACCAACTCAGGAATTGGTTGCGAAGGATCTTCATAGTTATGAATGGCGCTTTAAGCATATATTTAGAGGCCAGCCGCGTAGACACTTGCTCACGACTGGATGGAGTACTTTTGTGACTTCCAAGAGATTAGTTGCTGGAGATACCTTTGTGTTTCTGAGAGGGGGCAATGGAGAATTACGTGTTGGAGTGAGACGTCTAGCTCGTCAGGCAAGTAGCATGCCTTCATCTGTGATTTCCAGTCAGAGCATGCACCTGGGAGTTCTTGCAACTGCCTCTCATGCTGTTGCAACTCAGACTCTTTTTGTAGTATATTATAAGCCAAGGACGAGCCAGTTCATCATAGGCGTGAACCAGTATTTGGACGCCATGAAGAACAAGTTCAATGTTGGCATGAGGTTCAAGATGAGATACGAGGGGGATGATTCCGCTGAGACCGACAAAAGATTTTCGGGTACCATAGTTGGAGTTGAAGATATTTCTCCTCATTGGGTAAATTCACAATGGCGATCACTCAAGGTTCAATGGGATGAACATACAGCTGTTCCAAGACCTGATAGGGTTTCGCCATGGGAGATAGAACCCTTTGTTGCTTCTGCTTCTACACCCTCAGTTCAACCTACTATAGTAAAGACTAAAAGGCCTCGACCACCCAGCGAAATTCCAGATGTTGACACAGCATCTGCTGCTTCTGTTTTCTGGGATGCTGGTCTGCCACAGGCTGATATGACACAAATTAATGTTTTGGCCGAAAGCAAACGGAATGACAATACTGGTACGTGGCATCATATGCAAACTGACATGAATAGTAAAAACAACAGCAGCACCACTATGTTAAGGAATCAGACAGAAGGAAGTTGGCTATCGTCTCCCCATTCCAGTTGTCCATCTCATTTGTTTCAGGACACAACAGATGATAGCAAGGGTGTCTCAGTTTGGCCTGTTTCAATGTCTCACTCATCTAGATTGAACAACGATCACGTGCTTGACCAAGTTGACAAGGAGAGTAAAGTTGAGGCGGCTACAAGTTATCGTTTGTTTGGAATTGAGCTTATCGATCATTCTAGGAACTCGCCAGCTGTAGAGAAGGCATCTGCACATCCAGTAAATGTACCCAAAGTGACTACTGAAGGCTGTGCCAGCACCTTGTCCCTAACTGATGCTGGCTACAAGTCGGATGTACCGAAGGATTTGTCCAAGGAGAAGAAACAAGAACAGCAGCAAGTATCACCAAAGGAGACTCAGAGCAAGCAAATTTGTAGAAGTGTAATAAGAATTTTTTCTAACACGAGCCTTCTATTGATGTTCAAAACCTGCCAAAAGGTTCAAATGCAGGGTGTTGCGGTGGGTCGTGCTGTGGATTTGACCATGTTGGATGGGTATGATCAACTTATAAATGAATTGGAGGAGATGTTTGACATAAAGGGACAGCTTCAACACAGGAATATGTGGGAAATTGTCTTCACTGATGATGAAGGGGACATGATGCTTGTGGGAGATGATCCATGGCCTGAATTCTGTAATATGGCGAGAAGAATCTTCATTTGTTCCAGCCAGGATGTGAAGAAGATGAGTTCGGGAAGCAAACTACCAATCTCTTCGGTGGAAGATGGGACTAAATGCAATGGTCCACTGTGCCAGTGA 2130 0.462 MLNRASNVSAEAVVGSGESGDELYEQLWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCGVVNVHLLAEQETDEVYAQITLVPESNQDEPTSTDPCTPEPPRAPVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQPTPTQELVAKDLHSYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGGNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIIGVNQYLDAMKNKFNVGMRFKMRYEGDDSAETDKRFSGTIVGVEDISPHWVNSQWRSLKVQWDEHTAVPRPDRVSPWEIEPFVASASTPSVQPTIVKTKRPRPPSEIPDVDTASAASVFWDAGLPQADMTQINVLAESKRNDNTGTWHHMQTDMNSKNNSSTTMLRNQTEGSWLSSPHSSCPSHLFQDTTDDSKGVSVWPVSMSHSSRLNNDHVLDQVDKESKVEAATSYRLFGIELIDHSRNSPAVEKASAHPVNVPKVTTEGCASTLSLTDAGYKSDVPKDLSKEKKQEQQQVSPKETQSKQICRSVIRIFSNTSLLLMFKTCQKVQMQGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQHRNMWEIVFTDDEGDMMLVGDDPWPEFCNMARRIFICSSQDVKKMSSGSKLPISSVEDGTKCNGPLCQ 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6741g00007 709 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Mupr6741g00007 709 Gene3D - 125 229 IPR015300 -
Mupr6741g00007 709 Pfam Auxin response factor 254 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr6741g00007 709 CDD B3_DNA 126 228 IPR003340 GO:0003677
Mupr6741g00007 709 Gene3D - 596 687 - -
Mupr6741g00007 709 FunFam Auxin response factor 289 362 - -
Mupr6741g00007 709 SUPERFAMILY CAD & PB1 domains 603 675 - -
Mupr6741g00007 709 Gene3D - 289 364 - -
Mupr6741g00007 709 Pfam AUX/IAA family 645 683 IPR033389 -
Mupr6741g00007 709 Pfam AUX/IAA family 577 635 IPR033389 -
Mupr6741g00007 709 SUPERFAMILY DNA-binding pseudobarrel domain 118 257 IPR015300 -
Mupr6741g00007 709 FunFam Auxin response factor 596 687 - -
Mupr6741g00007 709 MobiDBLite consensus disorder prediction 553 576 - -
Mupr6741g00007 709 SMART B3_2 128 230 IPR003340 GO:0003677
Mupr6741g00007 709 ProSiteProfiles PB1 domain profile. 599 680 IPR000270 GO:0005515
Mupr6741g00007 709 Pfam B3 DNA binding domain 128 228 IPR003340 GO:0003677
Mupr6741g00007 709 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 22 687 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr6741g00007 709 FunFam Auxin response factor 126 230 - -
Mupr6741g00007 709 MobiDBLite consensus disorder prediction 555 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6741g00007 Mupr-Chr6741 43478 47649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6741g00007 16 692 B3 DNA Binding Superfamily AT4G23980 56.112 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr6741g00007 AUX_IAA 1.2e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6741g00007 K14486 - gmx:100779003 1206.43