Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr673g00005 ATGGCTCTTCTACTAGACAACTGTGAAAGCATTTTGCTCTCTTTGGACACACACAAATCAGTCCCTGCACCTTTCCTCACCAAAACATACCAACTCGTAGACGACCCCTCCACCGACCACATAGTCTCTTGGGGCGAAGACGACACCACCTTCGTCGTTTGGCGCCCTCCCGAATTCGCCAGGGACCTTCTTCCCAACTATTTCAAACACAACAACTTCTCAAGCTTCGTTCGCCAACTCAACACCTATGGTTTTAGAAAGATTGTGCCTGATAGGTGGGAGTTTGCAAATGAGTTCTTCAAGAAAGGAGAGAAGCAGTTGTTGTGTGAGATCCACAGAAGGAAAACTCCTCATCAGCAGCATCAGCAAGTGCAAGGCATGAACCATCAGCATCAGTTTGGAGTACTAAACGTGCCTCCTTTCTTTCCCTTCCACAACAGACTCAGCGTTTCACCTCCCAACGACTCGGACGAGTTAGCCAATTGGTGTGACTCGCCCCCGAGAGGAGTGGGAATAACCGCAAACAACGACAACTACAACACTGTGGCGGCGCTTTGTGAGGACAACGAAAGACTGAGGAGAAGCAACAACATGCTGATGTCGGAGCTGGCACATATGAAGAAGCTTTACAACGACATAATCTACTTCGTGCAGAACCATGTCAAGCCCGTGGCTCCAAGCAACACTTTCCCCACTTTTCTGCAAGCCTCTCCCACGCTTCAAAGGCCGGTGAAACACTTCGTGGGGTGTTATTCCAACAACACTAGTACTAACCAAGCGCGTGCTGCCAACTCTCCTACTAACAGCTCCATAACCATTGTGGATGAAGAGCGTAGCAGTAACAGCTGCAAGACCAAGCTTTTCGGGGTGTCTCTTCAGTCCAAGAAAAGGGTGCACCCCGAGTACAATATTCAAACTTCCGAAACAAATAATAGGCCGCGTTTCGTGTTGGAAAAGGATGAATTAGGCTTGAATCTCATGCCCCCTTCAACTTGCTAG 999 0.4875 MALLLDNCESILLSLDTHKSVPAPFLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKQLLCEIHRRKTPHQQHQQVQGMNHQHQFGVLNVPPFFPFHNRLSVSPPNDSDELANWCDSPPRGVGITANNDNYNTVAALCEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNTFPTFLQASPTLQRPVKHFVGCYSNNTSTNQARAANSPTNSSITIVDEERSSNSCKTKLFGVSLQSKKRVHPEYNIQTSETNNRPRFVLEKDELGLNLMPPSTC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr673g00005 332 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr673g00005 332 Gene3D - 17 116 IPR036388 -
Mupr673g00005 332 FunFam Heat stress transcription factor B-4 17 115 - -
Mupr673g00005 332 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr673g00005 332 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Mupr673g00005 332 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr673g00005 332 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr673g00005 332 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr673g00005 332 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr673g00005 332 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 275 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr673g00005 Mupr-Chr673 57813 59188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr673g00005 1 331 HSF AT1G46264 56.546 3.84e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr673g00005 HSF_DNA-bind 3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr673g00005 K09419 - gmx:100812466 534.258