Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr673g00001 ATGGCTGGTGACAACATGCACCAAACACAACCATCTTTAGGGAGAGCCTTGCCTACTGATTCAGAAGAATTCTCAACCTTGTTCAACCAACTCCTCCACAACTCTCCCCCTCTAGGAATGGACCCCAACCATTCACCTTCTGATTTCACCAACCCTGTTCCTTCCTCTCCCTCTAATTTCCATTTCTCTGATCCCCATCATTTCATCCCTCTCTCTGATGCCAAAACCTTCAAACAACACCCCAATCACACCCCTGATTTCACTTCTCCTCCTGAGAAGCATGTGGAGCCATCAAAACCTGTCCCACCACCACGTTCTTCGTCAAAGAGGAGCAGAGCTGCAGAGTTCCATAATTTGTCTGAAAAGAGAAGGAGGAGTAGGATTAACGAGAAAATGAAAGCCTTGCAGAATTTAATTCCAAATTCTAACAAGACAGACAAAGCTTCAATGCTAGATGAGGCCATAGAATATTTAAAGCAGCTTCAGCTTCAAGTGCAAATGTTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGTCTTTGCCAGGAGGACTACGACCTATGATAATGCCTCAAACCGGGTTGAACCTTGATGGGAGTAATGGACTTCAGAATTGTACCAGTATAATTGCCTCATCTTCAAATGATGAAAGCTTGGTGCGGCATGCTTTTAGTTTTCCAAAGCAATGCAGCTTCTCAAATCAGTCTGTTGTACCCTCAGTGACAAATATAGCTACTTCGGACACCTCCACTTTTCATCCCTCTATTAAGGTTCATATCCCTTCAATATCATCTTACATAGTTTTCATGGTAGAGAAATTATTATATGGTTTGAGATTACTGCATATCTATAATTCCAATTAA 864 0.419 MAGDNMHQTQPSLGRALPTDSEEFSTLFNQLLHNSPPLGMDPNHSPSDFTNPVPSSPSNFHFSDPHHFIPLSDAKTFKQHPNHTPDFTSPPEKHVEPSKPVPPPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMSLPGGLRPMIMPQTGLNLDGSNGLQNCTSIIASSSNDESLVRHAFSFPKQCSFSNQSVVPSVTNIATSDTSTFHPSIKVHIPSISSYIVFMVEKLLYGLRLLHIYNSN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr673g00001 287 SMART finulus 118 167 IPR011598 GO:0046983
Mupr673g00001 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 172 IPR036638 GO:0046983
Mupr673g00001 287 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 12 257 IPR031066 -
Mupr673g00001 287 MobiDBLite consensus disorder prediction 40 62 - -
Mupr673g00001 287 MobiDBLite consensus disorder prediction 1 16 - -
Mupr673g00001 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 112 161 IPR011598 GO:0046983
Mupr673g00001 287 Gene3D - 107 171 IPR036638 GO:0046983
Mupr673g00001 287 MobiDBLite consensus disorder prediction 1 124 - -
Mupr673g00001 287 FunFam Basic helix-loop-helix transcription factor 107 170 - -
Mupr673g00001 287 CDD bHLH_AtPIF_like 112 174 IPR047265 -
Mupr673g00001 287 MobiDBLite consensus disorder prediction 110 124 - -
Mupr673g00001 287 Pfam Helix-loop-helix DNA-binding domain 116 162 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr673g00001 Mupr-Chr673 5291 8116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr673g00001 112 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 68.182 1.11e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr673g00001 HLH 2.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr673g00001 - - gmx:100785332 384.415