LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr6737g00001	ATGTTCCCTTACATTTCCACCCCTTACCCTTCCTTCCCTTCATCATCTTCTTCCTCTTCATACCATCCTTTTCCTTTCCTCAACCTTGAGAATGCTTCTGCAAGCAACACCCTTCTTCATGACCCACTTTCTGTGCCTTACATGCCAACTCACAATAACCATCCAAGCATCCATGAAGCACTGACCAATTTGCAAGTCCCAGATCATAACTGTGGTAGTGGTGGCGGTGGCAGTGGTGGTTCTGTAATGAAACCGGACCCGAGCGGTGGCGGTGGTGGTGCTCCTCACTATGGCATTTCTTGTTTCCTCACAAAGAAGCCAGTTAAGAAAGACAGGCACAGCAAGATTTACACCTCTCAGGGTTTGAGGGACCGAAGGGTGAGGCTGTCCATTGAGATTGCTCGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTGGCAAGGAGCAAGAACAGCAACAACAGTGAGGAAGGAGCCAAGAGCTTCTCCTCTTCATCTGAGTGTGATGATGACTGTGAAGTGGTCTCTGAGATCAAGCATAAACAACAACAACTCCTCACTTGTGATGCTGCTACTTCACATAACCTACAACAAGGGTTGGATTCAAGTGATAACAAGTCTCCAACATCGGTGGCTGCAAGAGAGAGGATGAAGTTGAAAAGGACACAGAAGGAACCTGCAAGGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGGACTAGCAACAAGATTATGTGCAATGTTAACACCAACAACACAGGGAAGGTGCAACAACAAGACTTGAAGAAAAAGTTCCCTGCAATTGAAAATAACCACTCTCAAATCATGCATCAATCAAGGTCACCTACTCACCCTCACCACCTTTTGGGAAGTGAAGCACCTAGAGATGACTTCAACGTTATTGAGGAATCCATTGTGATCAAGAGAAAGTTGAAGCCTTCTTTGATGTCCTCTTCTCATCACCATCATCACCAAAACCTTGTGATCCCTAAGGAACCACCAAGTTTCAACAACAACAACAACAGTGAGTACCACCCCTTCTCCAATTTGTCTCCAAATTGGGATGCTAATGGATCCACTGGCCGCTCCAACTTCTGTGCCATAGCTAGCATGAATCTATCCACAGGTATGTGTTATGTTGTGTGTTTCATGAACATGTTCTATGAGTCTTCAATTTTCAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTTAACACTATATTATCTGATCAAATGCAACTCTTCTAGTCATTTGCCAAGGAATCATGAAGCATCTTTCTGTGTTTTCCACCAGTTACTTTTCTGTCCTATATTCCCTTTCCACAATTTATATACCTTGTTGCAAGAGGAGGTGGTACAGAAGAAATCTCAAGTTCTTTCAGCTTCTGTTTGTAATCGAGCTAAAGATGTTGAGCATGCACCTGATGAATTGCATTATTAA	1533	0.441	MFPYISTPYPSFPSSSSSSSYHPFPFLNLENASASNTLLHDPLSVPYMPTHNNHPSIHEALTNLQVPDHNCGSGGGGSGGSVMKPDPSGGGGGAPHYGISCFLTKKPVKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKNSNNSEEGAKSFSSSSECDDDCEVVSEIKHKQQQLLTCDAATSHNLQQGLDSSDNKSPTSVAARERMKLKRTQKEPARMKESREKARARARERTSNKIMCNVNTNNTGKVQQQDLKKKFPAIENNHSQIMHQSRSPTHPHHLLGSEAPRDDFNVIEESIVIKRKLKPSLMSSSHHHHHQNLVIPKEPPSFNNNNNSEYHPFSNLSPNWDANGSTGRSNFCAIASMNLSTGMCYVVCFMNMFYESSIFRASNLWKVLGGVHQSTLTLYYLIKCNSSSHLPRNHEASFCVFHQLLFCPIFPFHNLYTLLQEEVVQKKSQVLSASVCNRAKDVEHAPDELHY	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr6737g00001	510	MobiDBLite	consensus disorder prediction	168	188	-	-
	Mupr6737g00001	510	MobiDBLite	consensus disorder prediction	232	263	-	-
	Mupr6737g00001	510	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	89	365	IPR005333	GO:0003700
	Mupr6737g00001	510	MobiDBLite	consensus disorder prediction	67	91	-	-
	Mupr6737g00001	510	Pfam	TCP family transcription factor	108	269	IPR017887	-
	Mupr6737g00001	510	ProSiteProfiles	R domain profile.	251	268	IPR017888	-
	Mupr6737g00001	510	ProSiteProfiles	TCP domain profile.	109	167	IPR017887	-
	Mupr6737g00001	510	MobiDBLite	consensus disorder prediction	217	263	-	-
	Mupr6737g00001	510	MobiDBLite	consensus disorder prediction	217	231	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr6737g00001	Mupr-Chr6737	6182	8043	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr6737g00001	105	382	TCP Transcription Factor Family	AT1G67260	34.276	7.09e-33	126

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Mupr6737g00001		TCP	2.8e-45	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr6737g00001	-		-	gmx:100801549	576.244