Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6732g00003 ATGGAAAAGGATATCTGTGATCTTTCTCCAACATGGGATGGTGATAATGGAACCTCTACTGAGAAAAGGCTCAGGTTATTTGGCTTTGAGCTAAACCCTTCAAAAGAGGGTTGTGCCAAAGAGTCTGGTGAAGGAGATGAAAGTGTGAACTCCTCCAACTCAGTCTCATCAGGAGGAGACAAAACTGTGCAAGAGAAGACCTCAGCCAAAGACCCTGATGAGAGAAAGTTTGAGTGCCAATACTGTTTCAAGGAATTTGCAAACTCACAAGCATTAGGAGGCCACCAAAATGCTCACAAGAAAGAGAGAATGAAGAAGAAGAGGTTGCAGCTTCAATCCATAAACCGCTACCTACAACACCCTTTCCAAACCAACTATGGCTTTGCTTACCATGCCTCTGATACTCCTTGGTTCTATGACCCCTCTACCTATAACTCTGAGTTCACCCTTTGTGAGGAACCTCAGATTAGCTTCAATTCAAGTGTTATAGACACCAACTTTTCTTGTGATCAGAAATCTAGTTGGTATTCTCTTGCATCCCACCCTCCTTCCCAACAAGATACTTGCATGTTTACTTTCTCCAATACAAATAATAATACTCCTTTCATCTTCAAGCCTTGCCACTTCCCTGCTTCAAACCAAAGCCATAGTAAAGCCTTAGATCTTCAACTAGGCCTCAACTTGGAGTCAAATACAAGAAGTTCTATAAGAAGGACGTGA 720 0.4222 MEKDICDLSPTWDGDNGTSTEKRLRLFGFELNPSKEGCAKESGEGDESVNSSNSVSSGGDKTVQEKTSAKDPDERKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQSINRYLQHPFQTNYGFAYHASDTPWFYDPSTYNSEFTLCEEPQISFNSSVIDTNFSCDQKSSWYSLASHPPSQQDTCMFTFSNTNNNTPFIFKPCHFPASNQSHSKALDLQLGLNLESNTRSSIRRT 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6732g00003 239 Gene3D Classic Zinc Finger 50 126 - -
Mupr6732g00003 239 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Mupr6732g00003 239 FunFam zinc finger protein 5 51 127 - -
Mupr6732g00003 239 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Mupr6732g00003 239 MobiDBLite consensus disorder prediction 45 63 - -
Mupr6732g00003 239 MobiDBLite consensus disorder prediction 34 71 - -
Mupr6732g00003 239 PANTHER ZINC FINGER PROTEIN 5 19 229 IPR044299 GO:0010090
Mupr6732g00003 239 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6732g00003 Mupr-Chr6732 37740 38459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6732g00003 74 150 C2H2 Transcription Factor Family AT1G68360 40.404 3.92e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr6732g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6732g00003 - - gmx:100527006 394.815