Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6724g00001 ATGGGAATTGAAAGAGGAGGCTTGAAGGGGTTCAGGAGCGGCTGGACCGTGCCGCCGAAGCCATGCGACTCGTGCAAGCTGGCTTCGGCGGCGCTTTTCTGCCGCCCCGATTCCGCGTTTCTCTGCATCGCGTGCGATTCCAAGATTCACTGCGCCAACAAACTGGCGTCGCGCCACGAGCGCGTGTGGATGTGTGAGGTGTGCGAGCAAGCGCCCGCTGCTGTCACGTGCAAGGCAGATGCCGCCGCCCTCTGTGTCACGTGCGACTCTGACATCCACTCTGCCAACCCCCTCGCGCGCCGTCACGAGCGCGTTGCCGTCGAGCCTTTCTTCGACTCCGCCGAGTCCATCGTCAAAGCCACCAACGCGGCCTCCTTCGGCTTCATCGTCCCCTCCGACGACGGGACCGCTGCCTCCGACGCCTTCGGCCCCGACGACGCGGACGCGGCGGCGTGGCTCATACCGAACCCCAATTTCGGGTCCAAACTGATCGACGCCCCGGACATCAAGTCCAGGGAGATGTTCTTCTCGGAAATGGACCCCTTTCTCGATTTCGATTACTCAAACTCCTTCCAAAACAACAACAGCACTACAAACGATAGCGTCGTTCCGGTTCAAAGCAAACCCTCTCTAGCTCCTCCGCTGATGAATCATCACCACCAATCAGAAGGTTGCTTCGACATCGATTTTTGCCGATCGAAGCTATCGTCCTTTAACTACCCTTCACAGTCTCTTAGCCAGAGCGTTTCGTCGTCGTCGATGGATGTTGGAGTGGTGCCAGATGGGAACACGGTGTCGGACATGTCGTACTCGTTGGGTCGGAACAGTTCGGATTCGAGTGGGATTGTTGTGTCCGGGGGAAGTGGGGCGACGCAGTTGTGCGGGATGGATCGGGAAGCGAGGGTGCTTCGATACAGAGAAAAGAGGAAGAATCGAAAGTTCGAGAAGACTATTCGATACGCTTCGCGAAAGGCTTACGCGGAAACCCGGCCCAGGATAAAAGGCCGATTCGCGAAACGAACCGAAATTGACTCCGACGTGGACCGCCTCTACAGCCCCGCCGCTGCTGCGCTCATGCTCGACACTCCTTACGGCGTCGTACCTTCTTTTTAG 1113 0.5822 MGIERGGLKGFRSGWTVPPKPCDSCKLASAALFCRPDSAFLCIACDSKIHCANKLASRHERVWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSANPLARRHERVAVEPFFDSAESIVKATNAASFGFIVPSDDGTAASDAFGPDDADAAAWLIPNPNFGSKLIDAPDIKSREMFFSEMDPFLDFDYSNSFQNNNSTTNDSVVPVQSKPSLAPPLMNHHHQSEGCFDIDFCRSKLSSFNYPSQSLSQSVSSSSMDVGVVPDGNTVSDMSYSLGRNSSDSSGIVVSGGSGATQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYSPAAAALMLDTPYGVVPSF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6724g00001 370 CDD Bbox1_BBX-like 65 107 - -
Mupr6724g00001 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 21 357 IPR045281 GO:0009909
Mupr6724g00001 370 CDD Bbox1_BBX-like 21 64 - -
Mupr6724g00001 370 Pfam B-box zinc finger 62 106 IPR000315 GO:0008270
Mupr6724g00001 370 SMART bboxneu5 65 107 IPR000315 GO:0008270
Mupr6724g00001 370 SMART bboxneu5 17 64 IPR000315 GO:0008270
Mupr6724g00001 370 Pfam CCT motif 298 340 IPR010402 GO:0005515
Mupr6724g00001 370 ProSiteProfiles CCT domain profile. 298 340 IPR010402 GO:0005515
Mupr6724g00001 370 ProSiteProfiles Zinc finger B-box type profile. 60 107 IPR000315 GO:0008270
Mupr6724g00001 370 ProSiteProfiles Zinc finger B-box type profile. 17 64 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6724g00001 Mupr-Chr6724 8612 9814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6724g00001 1 370 C2C2-CO-like Transcription Factor Family AT5G57660 55.556 4.91e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mupr6724g00001 zf-B_box 3.3e-06 No_clan