Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr6723g00003 | ATGGTGACGACGGGGATTGAGGAAGTGCGAACTCTATGGATTGGGGATTTGCAGTACTGGGTGGACGAGTCGTATCTTTCACAGTGCTTCGCCCACAGCGGAGAAGTGGTTTCCATAAAAATCATACGGAACAAGATGACGCAGCAGCCGGAGGGGTACGGGTTCGTGGAGTTCGTTTCGCACGCCTCAGCGGAAGCCTTTCTTCGGACGTACAACGGCACTCAAATGCCCGGCACCGAACAAACCTTCAGGCTCAATTGGGCCTCGTTCGGCGATTCTGGGCCCGACCACTCTATTTTCGTGGGCGATCTTGCTCCCGACGTCACCGATTTCCTCCTCCAGGAGACTTTTCGGGCCCATTATCCTTCGGTTAAAGGGGCCAAAGTCGTGACGGACCCCGTCACAGGCCGGTCCAAGGGATATGGGTTCGTTAAGTTCGCGGACGAGACACAGAGGAATCGCGCCATGACCGAAATGAACGGCGTTTATTGCTCTACTCGCCCTATGCGTATAAGCGCCGCTACTCCTAAAAAGACCGCTTCTTTTCAACACCAATATGCTCCACCTAAAGCAATATATCAAATTCCTTCATATACTGCTCCGGTGAATACTGTTCCGCCAGAAAATGATGTGAATAATACCAATGTTTTTATTGGTAATTTGGATCTTAATGTGACGGAGGAGGAGCTGAAGCAAACCTTTGTGCAATTTGGAGATGTTGTGTCGGTCAAAATTTATGCGGGCAAAGGATATGGTTTTGTTCAATTTGGAACTAGAGCGTCTGCTGAAGATGCCATTCAGAGGATGCAGGGGAAGATAATAGGTCAACAAGTGATCCAGATTACGTGGGGTAGTACCTCGGCAGCTAGACAGGACGTACCTGGTGGCTGGGGCACACTGATGGATCCAAGTCAATGGAGTGCCTACTATGGATATGGGCAGGGTTATGAAGCATATGCTTATGGTGCTACTCATGATCCCTCCTTGTATGCTTATAGTGCATATGCTGGTTATGCACAATACCCTCAACAGGTTGAAGGTGCTCAAGACATGTCAGCAGTGTCTATGGAGGAGTTGTATGATCCCCTGGCAATGCCTGATGTCGATAAATTGAATGCTGCATATCTTTCAATACACGGAAATGCCATTTTGGGGCGATCCCTTTGGCAGAAAACTTCGCAATCTTTACAGCAAGCCTAG | 1200 | 0.49 | MVTTGIEEVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKMTQQPEGYGFVEFVSHASAEAFLRTYNGTQMPGTEQTFRLNWASFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPVTGRSKGYGFVKFADETQRNRAMTEMNGVYCSTRPMRISAATPKKTASFQHQYAPPKAIYQIPSYTAPVNTVPPENDVNNTNVFIGNLDLNVTEEELKQTFVQFGDVVSVKIYAGKGYGFVQFGTRASAEDAIQRMQGKIIGQQVIQITWGSTSAARQDVPGGWGTLMDPSQWSAYYGYGQGYEAYAYGATHDPSLYAYSAYAGYAQYPQQVEGAQDMSAVSMEELYDPLAMPDVDKLNAAYLSIHGNAILGRSLWQKTSQSLQQA | 399 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr6723g00003 | 399 | FunFam | Polyadenylate-binding protein RBP47B | 9 | 88 | - | - | |
Mupr6723g00003 | 399 | CDD | RRM1_SECp43_like | 11 | 91 | - | - | |
Mupr6723g00003 | 399 | FunFam | Polyadenylate-binding protein RBP47B | 89 | 187 | - | - | |
Mupr6723g00003 | 399 | SUPERFAMILY | RNA-binding domain, RBD | 95 | 183 | IPR035979 | GO:0003676 | |
Mupr6723g00003 | 399 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 97 | 176 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | Gene3D | - | 199 | 293 | IPR012677 | - | |
Mupr6723g00003 | 399 | PANTHER | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED | 8 | 290 | - | - | |
Mupr6723g00003 | 399 | CDD | RRM2_SECp43_like | 96 | 175 | - | - | |
Mupr6723g00003 | 399 | SMART | rrm1_1 | 215 | 282 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | SMART | rrm1_1 | 11 | 86 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | SMART | rrm1_1 | 98 | 172 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | SUPERFAMILY | RNA-binding domain, RBD | 7 | 78 | IPR035979 | GO:0003676 | |
Mupr6723g00003 | 399 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 99 | 164 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 216 | 279 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 12 | 80 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | Gene3D | - | 96 | 173 | IPR012677 | - | |
Mupr6723g00003 | 399 | SUPERFAMILY | RNA-binding domain, RBD | 193 | 314 | IPR035979 | GO:0003676 | |
Mupr6723g00003 | 399 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 214 | 286 | IPR000504 | GO:0003723 | |
Mupr6723g00003 | 399 | FunFam | polyadenylate-binding protein RBP45 | 198 | 293 | - | - | |
Mupr6723g00003 | 399 | Gene3D | - | 9 | 89 | IPR012677 | - | |
Mupr6723g00003 | 399 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 10 | 90 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr6723g00003 | Mupr-Chr6723 | 28898 | 31377 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr6723g00003 | 98 | 281 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 29.101 | 5.17e-16 | 78.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr6723g00003 | - | - | gmx:100813616 | 717.613 |