Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6716g00006 GTGAAGCAAAATGAGACTAGAATAAGAATATTTGTAATTTTGGCATCCACAATGGACGAGTCATGGGAAAAATGGTTTTGTGATTTGGAAAAGGATGAGTGCCATTTATTATTCAATGAACACAACATGAACCCTCTTGAGGGAGAGAGTTTTGTGCAGCCACTGCCAGAACTATCTTGGCCAAGTCTTTCTTGTGATTCAAATTTCAGTGCTGCATATATCAACAACAACATGGGCAATGCTTCATCTTTGGAAGAGAATTACACACAACATATTTCTTCAGAGAAACCAATGTTCCCCTCCTACATTCTATCTTTTGAAGACTCCACAGCACTGCCAAATGAACCCTCGAAGGAGACCAAAGAAGAAACAAACACTAGAAGGTCCAAGAGGGGTAGAAACACTTCTCAGATACAGGATCATATAATTGCTGAGAGGAAGAGGAGAGAGAACCTCTCCAGTTTGTTCATAGCACTTTCGGCCATTACTCCTGGATTAAAAAAGATGGACAAGTTGTCTATCCTGAACAACGCTATCGATCATATGAAATATCTTCAGAATCGCGTAAAAGATTTGGAGGAAGAGAAGAAAAAGAAAGAGATTGAATCCTTAACTGTGTTTGAAAATGTTAGTGTGGGTGACGAGTTCTATAGCATCTCTGATAAAAGTACGAAGATATTTCCCGAGATTAAAGCAATCATGTCAGCCAAAGATGTACTCATTAGAGTTATCTGTCACAAACGAAAGAATATTATAATCAATCTAATGTCCATTCTTGCAGCTCATAATCTCTCCATTCTTTGTACCAATGTTTTACCATTTGCCAATTCTATACTAAACATTTCCATCATTGCTAAGGTGGACCGTGAATTCAACATGGCAATGGATGACCTAGTGAAAATTTTGAACGAGGATTTGCTCAAGTGA 927 0.3808 VKQNETRIRIFVILASTMDESWEKWFCDLEKDECHLLFNEHNMNPLEGESFVQPLPELSWPSLSCDSNFSAAYINNNMGNASSLEENYTQHISSEKPMFPSYILSFEDSTALPNEPSKETKEETNTRRSKRGRNTSQIQDHIIAERKRRENLSSLFIALSAITPGLKKMDKLSILNNAIDHMKYLQNRVKDLEEEKKKKEIESLTVFENVSVGDEFYSISDKSTKIFPEIKAIMSAKDVLIRVICHKRKNIIINLMSILAAHNLSILCTNVLPFANSILNISIIAKVDREFNMAMDDLVKILNEDLLK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6716g00006 308 SMART finulus 142 191 IPR011598 GO:0046983
Mupr6716g00006 308 Coils Coil 175 202 - -
Mupr6716g00006 308 Gene3D - 135 206 IPR036638 GO:0046983
Mupr6716g00006 308 MobiDBLite consensus disorder prediction 114 140 - -
Mupr6716g00006 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Mupr6716g00006 308 PANTHER BHLH TRANSCRIPTION FACTOR 59 306 - -
Mupr6716g00006 308 Pfam Helix-loop-helix DNA-binding domain 140 186 IPR011598 GO:0046983
Mupr6716g00006 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 200 IPR036638 GO:0046983
Mupr6716g00006 308 MobiDBLite consensus disorder prediction 110 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6716g00006 Mupr-Chr6716 44849 46580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6716g00006 113 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.294 1.86e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6716g00006 HLH 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6716g00006 - - ccaj:109790958 280.411