Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6715g00005 ATGGAAGCAACAGCAACCACCGTGAGCAACGGCCAAAACGGTTCCTTCTGCTTGGCCGGTAAGGGCACTGACCCGCTGAATTGGGGCGTGGCGGCTGAGGCACTCAAGGGAAGCCACCTGGACGAGGTGAAGCGCATGGTGGCGGAGTACCGCATGCCAGTGGTCCGGCTCGGCGGCGAGACGCTCACCATCGCTCAGGTGGCTGCTGTCGCCTCCAACGACCGCGGTGTGACTGTGGAGCTCTCGGAGTCGGCGAGGGAAGGCGTTAAGGCGAGCAGTGACTGGGTGATGAACAGCATGAACAACGGCACAGACAGTTACGGTGTCACCACCGGCTTCGGCGCCACCTCACACCGCCGAACCAAACAAGGTGGTGCTTTGCAGAAAGAGCTCATCAGGTTTTTAAACTCTGGAATATTTGGAAATGGAACTGAATCAAACCACACTCTGCCACACACTGCAACCAGGGCAGCCATGTTAGTGAGGATCAACACTCTTCTTCAGGGGTACTCAGGCATTAGATTTGAAATCTTAGAAGCCATCACCAAGCTCCTTAACAACAACGTTACCCCGTGTTTGCCACTACGGGGTACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCTTACATTGCTGGTTTGCTAACTGGCCGACCAAACTCCAAAGCTGTTGGACCTTCTGGAGAAGTACTTAACGCTAAGGAAGCTTTTGAATTGGCTAGCATCAACTCCGAGTTCTTTGAATTGCAACCAAAGGAAGGCCTTGCCCTAGTTAATGGCACAGCTGTTGGTTCTGGCTTAGCTTCTATGGTTCTCTTTGAGGCAAATGTACTAGCTGTGTTGTCTGAAGTCCTATCGGCTATTTTTGCTGAAGTGATGCAAGGGAAGCCTGAATTTACTGACCATTTGACACACAAGTTAAAGCACCACCCTGGTCAAATTGAGGCTGCTGCTATTATGGAGCACATTTTGGATGGAAGTTCCTACATGAAAGCTGCTAAGAAGTTGCATGAGGTAGATCCCTTGCAAAAGCCAAAGCAAGATAGATATGCCCTTAGAACTTCACCTCAGTGGCTTGGTCCTCTCATTGAAGTCATTCGTTTCTCAACCAAGTCAATTGAGAGAGAGATTAACTCCGTGAATGACAACCCTCTGATTGATGTTTCAAGGAACAAGGCATTGCATGGTGGCAATTTCCAAGGAACCCCTATTGGAGTCTCAATGGACAACACACGTTTGGCTCTTGCATCTATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAACAATGGGCTGCCTTCGAATCTCACTGCTAGTAGAAATCCTAGCTTGGACTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCTTACTGCTCTGAACTCCAATATCTTGCAAATCCAGTAACAAGCCATGTCCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCATCTAGAAAGACAAATGAATCTATTGAGATCCTTAAGCTCATGTCTTCCACATTCTTGGTTGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAAAGCTCGGTCAAGAACACCGTGAGCCAAGTTTCCAAGAGGACTCTTACCACAGGTGTCAATGGAGAACTCCATCCTTCAAGATTTTGTGAAAAGGATCTGCTGAAAGTGGTTGATAGGGAGTATGTATTTGCCTACATAGATGACCCCTGCAGTGCTACATACCCATTGATGCAAAAACTTAGGCAAGTGCTTGTAGATCACGCATTGGTAAATGGAGAGAGTGAGAAGGATCTGAACACATCAATCTTTCAAAAGATTGCAACCTTTGAGGAGGAGTTGAAGACCCTCTTGCCAAAGGAGGTTGAAAGTGCAAGGGCTGCTTATGAGAGTGGCAAAGCTGCAATTCCAAACAAGATCAAAGAATGCAGATCTTACCCACTGTACAAGTTTGTTAGAGAGGAGTTAGGGACTGGATTGCTAACTGGAGAAAAGGTTAGGTCACCAGGTGAAGAGTTTGATAAATTATTCACAGCAATGTGCCAGGGTAAAATTATTGATCCTCTTCTGGAATGCCTTGGAGAGTGGAATGGAGCTCCTCTTCCAATC 2142 0.4687 MEATATTVSNGQNGSFCLAGKGTDPLNWGVAAEALKGSHLDEVKRMVAEYRMPVVRLGGETLTIAQVAAVASNDRGVTVELSESAREGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNSGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKEAFELASINSEFFELQPKEGLALVNGTAVGSGLASMVLFEANVLAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEVDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNESIEILKLMSSTFLVALCQAIDLRHLEENLKSSVKNTVSQVSKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLRQVLVDHALVNGESEKDLNTSIFQKIATFEEELKTLLPKEVESARAAYESGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLLECLGEWNGAPLPI 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6715g00005 714 NCBIfam phenylalanine ammonia-lyase 24 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mupr6715g00005 714 FunFam Phenylalanine ammonia-lyase 528 649 - -
Mupr6715g00005 714 FunFam Phenylalanine ammonia-lyase 262 570 - -
Mupr6715g00005 714 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Mupr6715g00005 714 Pfam Aromatic amino acid lyase 62 537 IPR001106 -
Mupr6715g00005 714 CDD PAL-HAL 60 525 IPR001106 -
Mupr6715g00005 714 Gene3D - 17 261 IPR024083 -
Mupr6715g00005 714 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Mupr6715g00005 714 FunFam Phenylalanine ammonia-lyase 17 261 - -
Mupr6715g00005 714 Gene3D - 528 649 IPR023144 -
Mupr6715g00005 714 PANTHER HISTIDINE AMMONIA-LYASE 20 714 IPR001106 -
Mupr6715g00005 714 SUPERFAMILY L-aspartase-like 24 714 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6715g00005 Mupr-Chr6715 26156 29633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6715g00005 24 714 Monolignol Biosynthesis Gene Families AT2G37040 84.805 0.0 1250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6715g00005 K10775 - gmx:100811101 1338.17