Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6703g00001 ATGAATAATAGTAAATATCATTTTGGAAGGGAAGCTGCTGTCTCCACCTCCAAGGCTATGACTTTTGCACACACACTCTCTCTCTCCTATTGGGGTTCCTTAGTTGATAAGGAGATATCTTCAATGCAAGGTCAGAGAGGTACAATTGGTTCCTTGCCAGAAACCATAGAATTTGATTGTGGATCTACATCAAGTGCTACTACAGTTGATCAGCATATTTTCTGGAATAATATGAGGAATCCTGCAGAAAATCAATATGTACTTTCTCCTGGTGATATAAACCCGTCTTATGTGAATTCTATAAACCATGAATGGCAGAACTTGAGTGGATGGAGCTTAGGTGAGCCAAGTTCCAGTAGTACACAGAATGAGGTTACCAACAATGAGCAGAAAAGAGAGCTAGGATTATCATCTTCAGTAAGTTCTGGTGCTATAGCTGGTCCGAGACTTGAAGAAAGGCGCTTTGAACCAAACAATACTTTTTCATTGGACAATGTCAATACAAGTCCTATGTATATGCGCAGCTCCAATTCTCACCTGGTGCCACAGACTCTGAACTTAAATGCAAGTTTAGCAGATAGTGGAAATGATAATAGCTATCATGTGGGACATCCTTCTAACTTGAACAAGTCTAGTGGACCGGTTAATGAGCATATTCCACCTACGATTGGTTCTGGTCCTTTTCTGCTTCCTTCTGGAACTAATGGCTTTTTAGTTGAGGATACTGATGGTAGGCCTCTTGACACCCGCCGTGTATCCTGTAAAAGAAAAGCTGCTGAACGAAATGTTGGACCATCTTCAGACAGTGGAAGTTCTAGCTATAGTCAGCATACAGATGGTAGTGCTTGGAACACACTTCCTACTCATGATTATGGGGGGAGCAGTTTTAACAGATCTGCCCCGACAGAACAGGTAAATGCAAGACTGGGCTTGAGTACAGGGGATGGAGCCTCTGAAAGCATGCCTGGGTCAAATGGTTCAGGGAGCTCAGAAAGCTTCCACAGAAATTTTCGTTTGAGGGTTAATCCGTCAAGTCAACAAATTTCCATTCCTCCCACTTCAGTCTCAAGTGGGAATGTTATTAGGAACTCTGGTGTTTCTTCATCCTCTCCTATGTTGCAACGATTTCATCCTGTTGATAATTCTTTGGACTTGAGGGGACTGTCATCTGGGGCAAACCCATTTGAGAGGCCAGGTGATGGTGAATTTGGAATTCCGTATTCGTTACGATCTTTGGCTGTAGCCGGTGAAGGAAGTAGTAGACTTGTGTCTGAGCTCCGCAATGTGTTGGGCCTCATGCGTAGGGGTGGGAACCTGCGATATGAGGATGTTATGATCCTCGACCATTCAGTGTTCTCTGGAATTGCTGATATTCATGATCGACACAGGGATATGCGGCTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCTCTGGAAGAACGCATTGGAAATGTGAGCACTGGATTGAGTGAGGAGACCGTATTGAAACTTTTGAAAAAGAAGAAGTATTCAGCTGAACCAGGTTCTCAGCATGAGGCAGAACCTTGCTGTGTTTGTCAGGAGGAGTATAAAGATGGAGATGATATGGGAACACTGGATTGTGGGCATGATTACCATACAGACTGTATTAAACAGTGGCTAATGCATAAGAATTTGTGTCCCATTTGTAAGACAACGGGCTTGGCAACATGA 1698 0.4323 MNNSKYHFGREAAVSTSKAMTFAHTLSLSYWGSLVDKEISSMQGQRGTIGSLPETIEFDCGSTSSATTVDQHIFWNNMRNPAENQYVLSPGDINPSYVNSINHEWQNLSGWSLGEPSSSSTQNEVTNNEQKRELGLSSSVSSGAIAGPRLEERRFEPNNTFSLDNVNTSPMYMRSSNSHLVPQTLNLNASLADSGNDNSYHVGHPSNLNKSSGPVNEHIPPTIGSGPFLLPSGTNGFLVEDTDGRPLDTRRVSCKRKAAERNVGPSSDSGSSSYSQHTDGSAWNTLPTHDYGGSSFNRSAPTEQVNARLGLSTGDGASESMPGSNGSGSSESFHRNFRLRVNPSSQQISIPPTSVSSGNVIRNSGVSSSSPMLQRFHPVDNSLDLRGLSSGANPFERPGDGEFGIPYSLRSLAVAGEGSSRLVSELRNVLGLMRRGGNLRYEDVMILDHSVFSGIADIHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETVLKLLKKKKYSAEPGSQHEAEPCCVCQEEYKDGDDMGTLDCGHDYHTDCIKQWLMHKNLCPICKTTGLAT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6703g00001 565 SMART ring_2 518 558 IPR001841 -
Mupr6703g00001 565 MobiDBLite consensus disorder prediction 310 333 - -
Mupr6703g00001 565 MobiDBLite consensus disorder prediction 112 144 - -
Mupr6703g00001 565 FunFam E3 ubiquitin-protein ligase MBR2 486 563 - -
Mupr6703g00001 565 Pfam Ring finger domain 518 559 IPR001841 -
Mupr6703g00001 565 SUPERFAMILY RING/U-box 510 561 - -
Mupr6703g00001 565 ProSiteProfiles Zinc finger RING-type profile. 518 559 IPR001841 -
Mupr6703g00001 565 MobiDBLite consensus disorder prediction 189 218 - -
Mupr6703g00001 565 MobiDBLite consensus disorder prediction 234 286 - -
Mupr6703g00001 565 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 250 563 IPR045191 GO:0061630
Mupr6703g00001 565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 481 562 IPR013083 -
Mupr6703g00001 565 MobiDBLite consensus disorder prediction 112 153 - -
Mupr6703g00001 565 MobiDBLite consensus disorder prediction 243 262 - -
Mupr6703g00001 565 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6703g00001 Mupr-Chr6703 17077 23153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6703g00001 410 565 C3H Transcription Factor Family AT2G15530 62.500 8.62e-66 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6703g00001 - - gmx:100791026 565.459