Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6702g00014 ATGACAGATCCTCAGTCTAATTTATACGGTGGAACCTTCAACTTCATGCCCCTCTATTCTCACCACTCTTCTTTTACCTCTCAATCAAACCTATTCTCTCCCTACCCTCTTGCACACTCAAACAACAACACCTTTTCCATTCAATCCGAAGCCCCTCCTTCCCCTCCTCTCAGAGAAGCCCTTCCTCTCATAAACAACATAAAACAGAAGGAAAATGAACCCTCAAACTGTGGGGAAGGACAAAAAAGGGACAAAGATGAGAGCCTTTTGACTAGCACTGAGGATGGTGATGGTGGTGATGAAACTGTGACAGTAGCACTGCGCATAGGGCTTCCTAGCGTTGCTGCTTCTGATCTTCTTGGATCGAGGAAGATCTCAGCTTGTGGTGAAAAAGGGGAAGTGAGAACTGTGATTTCTGGACACCCTTTGGATAGAATAAACAAGGTTCAGTATTGGATTCCCACCCCTTCTCAGATTCTCATTGGTCCTACTCAGTTTTTATGTTCTGTGTGCTCTAAGAGTTTCAACAGATATAATAATCTTCAGATGCATATGTGGGGACATGGATCTCAATATAGAAAGGGGCCTGATTCTCTAAAAGGAACACAACCATCAGCTATGCTAAGGCTTCCATGCTTTTGTTGTGCACCAGGTTGCAAGCACAACATTGACCACCCAAGAGCAAGGCCTCTCAAGGACTTCAGAACTCTTCAAACGCATTATAAGAGAAAACACGGCATTAAACCCTACATGTGCAGAAAATGTGACAAAGCATTTGCAGTGAAAGGTGATTGGCGGACACATGAGAAGAACTGTGGCAAAATTTGGTACTGTTTATGTGGGTCTGATTTTAAACACAAAAGATCTCTAAAAGATCACATAAAGGCCTTTGGCCATGGCCACGGTGCTATTGACATTGATTGCATGCAAGAAGATGAAGGGGGCTCCGAAATTGAACATGATGGCGATAGCTCAATGTGA 981 0.4363 MTDPQSNLYGGTFNFMPLYSHHSSFTSQSNLFSPYPLAHSNNNTFSIQSEAPPSPPLREALPLINNIKQKENEPSNCGEGQKRDKDESLLTSTEDGDGGDETVTVALRIGLPSVAASDLLGSRKISACGEKGEVRTVISGHPLDRINKVQYWIPTPSQILIGPTQFLCSVCSKSFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPSAMLRLPCFCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCDKAFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGHGHGAIDIDCMQEDEGGSEIEHDGDSSM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6702g00014 326 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 193 IPR013087 -
Mupr6702g00014 326 Gene3D Classic Zinc Finger 165 188 - -
Mupr6702g00014 326 ProSitePatterns Zinc finger C2H2 type domain signature. 168 188 IPR013087 -
Mupr6702g00014 326 MobiDBLite consensus disorder prediction 69 99 - -
Mupr6702g00014 326 SUPERFAMILY beta-beta-alpha zinc fingers 158 188 IPR036236 -
Mupr6702g00014 326 SUPERFAMILY beta-beta-alpha zinc fingers 234 270 IPR036236 -
Mupr6702g00014 326 Gene3D Classic Zinc Finger 228 304 - -
Mupr6702g00014 326 SMART c2h2final6 250 270 IPR013087 -
Mupr6702g00014 326 SMART c2h2final6 166 188 IPR013087 -
Mupr6702g00014 326 SMART c2h2final6 276 299 IPR013087 -
Mupr6702g00014 326 MobiDBLite consensus disorder prediction 75 92 - -
Mupr6702g00014 326 PANTHER ZINC FINGER PROTEIN WIP2 21 318 IPR043584 GO:0003700|GO:0010468
Mupr6702g00014 326 FunFam Zinc finger protein WIP2 219 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6702g00014 Mupr-Chr6702 51974 54112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6702g00014 103 319 C2H2 Transcription Factor Family AT3G57670 64.800 9.66e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr6702g00014 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6702g00014 - - vra:106761045 577.015