Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr66g00004 ATGGGCAAACCCGCTAGTTCCTCCTCCTCCTCTATCAGCAGCAGCAGCAACCATCATCACCTCTTTATTTCAACAGCATCCTCTCTCACGCAAGAACTTCCCACTGATCTTAGCCTTGGACTCACCATTTCTGCCACTCAACATGTTGCCTCTTCTATTTCAAGGGGCCAATGGCAACCACACCACCCTCTTGTCAACACTTCCCAACCTGCTGAACCAAATGATTGCAACGATCATAGCAGCTTCTTTGTCAAGGTCTACATGGAAGGCATTCCAATTGGAAGAAAACTCAATATACTAGCTCATGGTGGCTACTATGACTTAGTCAAGACTCTTGAACACATGTTCGACACTACCATTCTTTGGGGGACAGAGATGAATGGAGTGCAACCGGAGAGATGCCATGTGTTAACTTATGAAGATGAAGAAGGGGATTTGGTCATGGTTGGAGATGTTCCTTGGGAAAACAAACGCATTATATCTTCCATTAATGTGCTTGCTCTTTTGATCGTGCAGGATGTTCTTATCCACAGTAAAGAGGTTGAAGATCACAAGGGTAGACACATTCGGGTGTTGAATGTCTCTTCCTCCCACCGTACGTTGAGCAATAAAAATCCTACG 621 0.4509 MGKPASSSSSSISSSSNHHHLFISTASSLTQELPTDLSLGLTISATQHVASSISRGQWQPHHPLVNTSQPAEPNDCNDHSSFFVKVYMEGIPIGRKLNILAHGGYYDLVKTLEHMFDTTILWGTEMNGVQPERCHVLTYEDEEGDLVMVGDVPWENKRIISSINVLALLIVQDVLIHSKEVEDHKGRHIRVLNVSSSHRTLSNKNPT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr66g00004 207 ProSiteProfiles PB1 domain profile. 81 173 IPR000270 GO:0005515
Mupr66g00004 207 Gene3D - 75 177 - -
Mupr66g00004 207 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 57 167 IPR003311 GO:0005634|GO:0006355
Mupr66g00004 207 Pfam AUX/IAA family 68 155 IPR033389 -
Mupr66g00004 207 SUPERFAMILY CAD & PB1 domains 76 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr66g00004 Mupr-Chr66 53560 55212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr66g00004 55 180 B3 DNA Binding Superfamily AT5G62000 27.344 5.65e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr66g00004 AUX_IAA 1.1e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr66g00004 K14484 - gmx:100783140 256.914