Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr669g00003 AGGAATAGAGAAAGAGAGAGAAAAAACAGCACAAGGATGGAGCTTTCTCAACTTGGTTTTCTGGATGAGCTACTTGCTCCAAGAAAAGACACTTGGAGTGCTTTGTCCACTGGGTTGAATGAGTTACTCCCTAGTGGTTGGAGCTTTGACTCTTTTGATGAGAACCAAGGTTTAGCTTCTTTGAACCCCTCATTTGCTGCATTTTCAACACCACTAGACCACAGATTTGAATGCCCTTATGGAAGTGAAGCAGCATATCCTTTTGTTGATGGCTTCACATTGCCAGACCTTGATTCATCGTACACCAGGAATGATGAGTCAGCACCACTTTTGCCTCAAGAAGATAACCCCTCATTGGAGGATGAAGAGTTTGGCTTTCTGGGAAGTGATAACCAGAGTTTGGAACAAGCAAAAAATGGCTGCAAAATTGAGGAACAAGTGTCAGAGATTCCAGTTTTCAACATGGGGATGTGTGGAGAGAAAAAGCTCAAATCCAAAAAACTAGAAGGGCAGCCCTCAAAGAATCTCATGGCAGAAAGAAGGAGAAGAAAGCGTTTGAATGACCGTCTTTCCATGCTTAGGTCAATAGTCCCTAAGATTAGCAAGATGGACAGGACCTCCATTCTTGGAGATACCATTGATTACATGAAAGAGCTTCTAGAAAGGATAGGTAAGTTGCAAGAAGAAGAAATGGAGGAGGGAACAAATCAGATAAGCCTCTTGGGCATTTCAAAGGAGCTAAAGCCAAATGAAGTAATGTTTGATGTTGAGAGAAGGGACCAGGACACAAGGATTAGCATCTGCTGTGCCACAAAGCCTGGATTACTACTGTCCACAGTGAACACCTTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGCTTCAATGATTTTTCAATGCAAGCATCTTGCTCAGAGGCAGCTGAGCAGAGAAATTGCATGAGCCCGGAAGAGATAAAGCAAGCACTATTCAGAAATGCAGGTTATGGTGGAAGATGTCTCTAG 1014 0.43 RNRERERKNSTRMELSQLGFLDELLAPRKDTWSALSTGLNELLPSGWSFDSFDENQGLASLNPSFAAFSTPLDHRFECPYGSEAAYPFVDGFTLPDLDSSYTRNDESAPLLPQEDNPSLEDEEFGFLGSDNQSLEQAKNGCKIEEQVSEIPVFNMGMCGEKKLKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEEMEEGTNQISLLGISKELKPNEVMFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSMQASCSEAAEQRNCMSPEEIKQALFRNAGYGGRCL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr669g00003 337 Pfam Helix-loop-helix DNA-binding domain 176 219 IPR011598 GO:0046983
Mupr669g00003 337 SMART finulus 176 225 IPR011598 GO:0046983
Mupr669g00003 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 230 IPR036638 GO:0046983
Mupr669g00003 337 CDD ACT_UUR-ACR-like 263 304 - -
Mupr669g00003 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Mupr669g00003 337 Gene3D - 162 235 IPR036638 GO:0046983
Mupr669g00003 337 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 81 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr669g00003 Mupr-Chr669 29836 31295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr669g00003 161 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 68.539 7.83e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr669g00003 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr669g00003 - - gmx:100806571 593.578