Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6697g00001 ATGGGATTTCCAGTGGGGTACACGGAGCTCCTCTTCCCGAAGCTTCTTCTGCACATCCTCTCTCTCTTGGGCTTCCTCCGTAAGCTCATTTGCGCCCTCTTCCGCTTCATGGGCCTGCACGATTTCCTCGAGCCCGACATTGCGTGGCCCGAACACGACACCCGAATGCCCGAATTCGAATCGGTCTCGGCGGTGCTGATCCGGGAAATCCTGCCGGTGGTCAAGTTCCGGGACCTCGTGGACCCGCCGGAGAGCTGCGCGGTGTGTCTGAGCGAGTTCGACGAAAACGATGAGATCAGACGGCTGGCGAATTGTCGACACATCTTCCACCGAGGATGTTTGGACCGTTGGATAAGGTACGATCAGAGAACGTGTCCTCTCTGCAGAACGCCCTTCATACCCGACGATATGCAAGGTGCCTTTATTGAGAAACTCTGGGCTGCATCAGGGATCCCTGAACTTTACGCCGAATATCCTCATAATTGGGATGGATCTGGTGGAGAATGGGAGGAATGGGAGGAATTAATTCTTAATGAAGAGAAAGAGCAAACATTTTTCAGTTTTAGCGTTTAA 573 0.5305 MGFPVGYTELLFPKLLLHILSLLGFLRKLICALFRFMGLHDFLEPDIAWPEHDTRMPEFESVSAVLIREILPVVKFRDLVDPPESCAVCLSEFDENDEIRRLANCRHIFHRGCLDRWIRYDQRTCPLCRTPFIPDDMQGAFIEKLWAASGIPELYAEYPHNWDGSGGEWEEWEELILNEEKEQTFFSFSV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6697g00001 190 SMART ringv_2 85 129 IPR011016 GO:0008270
Mupr6697g00001 190 PANTHER RING ZINC FINGER PROTEIN-RELATED 23 141 - -
Mupr6697g00001 190 SUPERFAMILY RING/U-box 66 135 - -
Mupr6697g00001 190 SMART ring_2 86 128 IPR001841 -
Mupr6697g00001 190 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Mupr6697g00001 190 CDD RING-H2_RHA1-like 86 132 - -
Mupr6697g00001 190 Pfam Ring finger domain 85 129 IPR001841 -
Mupr6697g00001 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 136 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6697g00001 Mupr-Chr6697 18677 19518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6697g00001 1 150 C3H Transcription Factor Family AT1G63840 55.484 4.86e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6697g00001 K16281 - gmx:100817079 267.7