Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6680g00001 ATGGTAGGCCTGACCCAAAAAAATAAAGAAGAGAAGCCCAATTGTGGAACGGGGAGGTCCATACTAGCAGTGGTTGAAATTAAGGCTTTAGTTCTGCAATGGACACTTTTACCTGGTGCCTACAAGTATGTTTCAGAGCTATGGCGCAAGAAGCAGTCTGATGTCATGCGCTTCTTGCAGCGTGTGAGGTGCTGGGAGTATAGGCAGCAACCTTCCATTGTTCGATTGACAAGGCCAACCCGCACTGACAAGGCTCATCGTTTGGGTTATAAGTCTAAGCAGGGTTATGTGGTTTACCGTGTTCGTGTTCGAAGGGGTGGCCGAAAGAGGCCAGTTCCCAAGGGTATTGTTTATGGGAAGCCAACAAACCAGGGTGTTACTCAACTGAAATTTCAGCGCAGCAAGAGGTCAGTTGCTGAGGAGCGAGCTGGACGGAAGCTGGGTGGACTTAGGGTCCTCAATTCTTACTGGGTGAATGAGGACTCGACTTATAAATACTTTGAGATAATTCTGGTGGATGTTGCTCATGCTGCTATCAGAAATGACCCGAGAATCAATTGGCTCACCAATCCAGTGCATAAGCACAGGGAACTGCGTGGGCTTACCTCTGCTGGAAAAAGCAACAGGGGTTTACGGGGCAGAGGACATCTGTACCACAAAGCACGTCCATCCCGCAGAGCAACCTGGAAGAGAAACAACACCCTGTCCCTTCGCCGCTACCGCTAA 726 0.4945 MVGLTQKNKEEKPNCGTGRSILAVVEIKALVLQWTLLPGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRTDKAHRLGYKSKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHAAIRNDPRINWLTNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6680g00001 241 SMART Ribosomal_L15e_2 39 230 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mupr6680g00001 241 MobiDBLite consensus disorder prediction 201 225 - -
Mupr6680g00001 241 PANTHER RIBOSOMAL PROTEIN L15 39 241 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mupr6680g00001 241 FunFam Ribosomal protein L15 38 241 - -
Mupr6680g00001 241 Pfam Ribosomal L15 39 227 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mupr6680g00001 241 Gene3D Ribosomal protein l15e 38 241 IPR024794 GO:0003735|GO:0005840
Mupr6680g00001 241 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 39 232 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6680g00001 Mupr-Chr6680 381 2546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6680g00001 39 241 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 89.655 5.77e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6680g00001 K02877 - gmx:100798324 383.645