Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr667g00003 ATGTTGATTAAAATTCACCCAAATTGGTTTGCCCCATATTTCCCAGTGCCACACAAGATTGAGGCTTGTTTTGTGTTGAGTAAGTGCCTGTTATTCACGCATCCTCCTCTTCCATGTGAAGTTGATAATGGTAAAGTAAGAAGAAGAAGAAGAAAAAGAAATTGGCCATTGAGTTGTGGTTCGGGGGAGGCACATGCACAGTCTCTATCTGAATGGGAATTGCAGGAAGCTCGTACGGCAGTTTCAACTTATCTGAGAGAATTGGGGGTGTCGGAGGAGGATTCAACGTCCATCGCATCAAAGTCACCCGGTTATGTGAAAATGTTGGTGGAAGGTGTGAGGGATTTGGAGCAGTGCCAGTGGGAACAATTTGCGGCCTTCAGCTTCAAGGACAAGATTCTTCATATCGCTGCTCAAAAAGGCGACAACGGGAAAGTTGCCTACTTAGAGACTCTGGGATTCACTCTCTCTTCGTCTATGAACGTGGCCAGATATCTCTTCACTCACACCCTCCCATCTCTCATGCACAATGTTATGCGTATGAAGCAACTCTTCTTTTCTTCCCAGGATGACTTTCACTTCCACTTACTTATCAAAAATATTCGCCTCATGATGCGCCATTTATCTATTTCAATTGATGAAGACCTGCAACACACTTTGTCCTTTTTCGAAAAGCTTGAAGCAAGGCCTGGTGGTCTCAACATTTTGGCTTCCAAAGATGCCGCTTTTCATCGCTTAATCGAATCATTTCCTCGTCTACTTCAGTTATCAGTAGACAACCACTTCACACGCTTACTGGATTTTCTCTACAATATTGGAATCCCCACATTTCGCATCTCACACATAATACTGGCTTTTCCTCCTCTTCTCTTCTGGAATCTTCACCTCCTTCAAACTAGAGTCCTCGCCTTGAAGGAGATTGATGTGCCTGATAAAGATTATGCTAAGTTGTTGTTAAAATTTCCTTGGGTTCTATCTACAAGTATTCAAGAGAATCATACGGAGGTCCTTGCCTTTTTATATTCTATCAAGGTTCCAAAGACATGGATAGACCGTGCAATTGAAAGCCACCCTCATCTGTTGAGTTGTTCAACTAGCAAGCTGGAGTTGATGGTGAATCAGTTTGCTGAACTAGGAGTTCGAAACAAGAAGTTGAGTCAGGTTATTGCTAAAAGTCCTCAAGTACTATTACGGAAGCCCAAAGACTTTCTACAGCTTCAATCAACACTATGGTATCCTGCCATTGACTCTATAGCCTTTCTTCATGGAGATTTAGAAGAGGATGTTTATAGGAAGATTCCACCCTGGTTTAATCCTAGTAATAAAGGAAATAAGGTAGACAGGTTGAAGAAGGTCCTGTTTGGGTTGAAGCAGTCTCCCCATGCTTGGTTTGCAATGAAGAGTGAAGACAATGGTGTCTTTGTGGTACAAAGAATCAGGGGGATCACACTTTCTTCTTTAAAGGCAAGCTAA 1473 0.4243 MLIKIHPNWFAPYFPVPHKIEACFVLSKCLLFTHPPLPCEVDNGKVRRRRRKRNWPLSCGSGEAHAQSLSEWELQEARTAVSTYLRELGVSEEDSTSIASKSPGYVKMLVEGVRDLEQCQWEQFAAFSFKDKILHIAAQKGDNGKVAYLETLGFTLSSSMNVARYLFTHTLPSLMHNVMRMKQLFFSSQDDFHFHLLIKNIRLMMRHLSISIDEDLQHTLSFFEKLEARPGGLNILASKDAAFHRLIESFPRLLQLSVDNHFTRLLDFLYNIGIPTFRISHIILAFPPLLFWNLHLLQTRVLALKEIDVPDKDYAKLLLKFPWVLSTSIQENHTEVLAFLYSIKVPKTWIDRAIESHPHLLSCSTSKLELMVNQFAELGVRNKKLSQVIAKSPQVLLRKPKDFLQLQSTLWYPAIDSIAFLHGDLEEDVYRKIPPWFNPSNKGNKVDRLKKVLFGLKQSPHAWFAMKSEDNGVFVVQRIRGITLSSLKAS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr667g00003 490 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 418 465 IPR013103 -
Mupr667g00003 490 PANTHER CGI-12 PROTEIN-RELATED 147 367 IPR003690 GO:0003690|GO:0006355
Mupr667g00003 490 Gene3D Transcription termination factor 3, mitochondrial 233 408 IPR038538 -
Mupr667g00003 490 Pfam mTERF 266 401 IPR003690 GO:0003690|GO:0006355
Mupr667g00003 490 SMART mt_12 351 381 IPR003690 GO:0003690|GO:0006355
Mupr667g00003 490 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Mupr667g00003 490 SMART mt_12 280 310 IPR003690 GO:0003690|GO:0006355
Mupr667g00003 490 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr667g00003 Mupr-Chr667 36519 44111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr667g00003 417 464 Receptor kinase-like Gene Family AT4G23160 45.283 2.02e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr667g00003 mTERF 2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr667g00003 K15031 - gmx:100802127 567