Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6675g00001 ATGGAGAAACAGAGGCGTTTGGAGCAGATCCTCAGATCCCAAGAACGAGGTTCTAAGGTCATAATATTTTGTTCCACAAAGAGGTTATGTGATCAGCTTGCTCGTAGTATTGGCCGGAGTTTTGGAGCTGCTGCAATTCATGGGGACAAGTCTCAAGGTGAGAGAGACTGGGTTTTAAGTCAGTTCCGGACTGGGAAGTCACCAATTCTGGTTGCCACTGATGTTGCAGCTCGTGGGCTTGATATTAAGGATATAAGGGTAGTGATCAATTATGATTTCCCCACCGGAATTGAGGACTATGTGCACCGAATAGGAAGAACTGGAAGGGCAGGTGCTACTGGAGTATCATATACCTTTTTCTCTGAGCAGGACTGGAAACATGCGGGTGATCTAATCAAAGTTTTGGAGGGTGCAAATCAGCATGTGCTTCCAGAGTTAAGACAGATGGCTTCTCGTGGACCACCAAACTTTGGAAAGGATCGGGGCGGGATGAGTCGATTTGATTCTGGTGGTGGTGGTAGTGGTGGGCGCTGGGAGACTGGTGGTCGTGGTGGCTTTGGGGGTCGTGGTGGTGGTATGAGGGATGGTGGCTTTGGGGGACGTGGTGGTAGCATTAGGGATGGTGGATTTGGTGGGGGACGTGGTGGTGGCTTTGGTGGTCGTGGTGGCTTGAGGGATGGAGTTAGTGGGCATGGTGGGAGAGGTGATTTCTTTCCTGGTAGGGGCAACAGGGGTAGGGGATCTGGTGGCCCTCGGGGTGGTCATGTTGGTTGGGGTAGAGGTGAACGTTCTCTGGATGACCGGTACAACATGGATGGGCGTGGACAAGGTTTTGGACGTGGACGATTTGACAATAGAAGAGATGCTTCTTACAAAAATAGTGGCAGAAGGAATAGTCGTAGCCCTGAAAGAGTTCGAACATGGGACTATAGCAGAAGTCGTAGTAGAAGTAGGAGCAGGAGCTGGAGCAGGGGGCGGAGTCGAAGCCGCAGCTGGTCTCGTGGTCGTAGTCGCAGCTATAGCCGTAGCATTAGTCCGCGTCGTAGTCGCAGTCGTAGTCGCAGCCGTGGCCGCAGTGATCGAAGTTACAGTCGCAGTCGTAGCCATAGCCGCAGTCGCAGCCCCAGTTATGATAGGCGTGATAGGTCAGATCAACAACTTTCTGATCAAAAGGATCTCAAGGCACTGGAAGTAGGAACTTCTGATCCAAGAATGCCTCCCGGGTCTCCTGGCACACAAGGGAATTCCTTTTTAGGAACTGAACAAGTGGAGACCCAAGCTGTTGGGAGCACTGATCCTGTTAATCCCGAAGTTGTAGCAGACCGAAGTCATCAATCAGCTTCTGATATT 1350 0.5133 MEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRSFGAAAIHGDKSQGERDWVLSQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMASRGPPNFGKDRGGMSRFDSGGGGSGGRWETGGRGGFGGRGGGMRDGGFGGRGGSIRDGGFGGGRGGGFGGRGGLRDGVSGHGGRGDFFPGRGNRGRGSGGPRGGHVGWGRGERSLDDRYNMDGRGQGFGRGRFDNRRDASYKNSGRRNSRSPERVRTWDYSRSRSRSRSRSWSRGRSRSRSWSRGRSRSYSRSISPRRSRSRSRSRGRSDRSYSRSRSHSRSRSPSYDRRDRSDQQLSDQKDLKALEVGTSDPRMPPGSPGTQGNSFLGTEQVETQAVGSTDPVNPEVVADRSHQSASDI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6675g00001 450 Pfam Helicase conserved C-terminal domain 3 111 IPR001650 -
Mupr6675g00001 450 Gene3D - 1 153 IPR027417 -
Mupr6675g00001 450 MobiDBLite consensus disorder prediction 149 450 - -
Mupr6675g00001 450 MobiDBLite consensus disorder prediction 279 316 - -
Mupr6675g00001 450 SMART helicmild6 27 111 IPR001650 -
Mupr6675g00001 450 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 6 150 IPR001650 -
Mupr6675g00001 450 FunFam ATP-dependent RNA helicase RhlB 1 153 - -
Mupr6675g00001 450 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 150 - -
Mupr6675g00001 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 156 IPR027417 -
Mupr6675g00001 450 CDD SF2_C_DEAD 2 120 - -
Mupr6675g00001 450 MobiDBLite consensus disorder prediction 406 432 - -
Mupr6675g00001 450 MobiDBLite consensus disorder prediction 317 355 - -
Mupr6675g00001 450 MobiDBLite consensus disorder prediction 356 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6675g00001 Mupr-Chr6675 395 2390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6675g00001 18 149 Eukaryotic Initiation Factors Gene Family AT3G19760 39.850 6.89e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6675g00001 K12823 - gmx:100806371 304.679