Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6674g00001 ATGGCAATGGAGGAGGCAACTTCTGTTGGGCTTGGTCCCAGATATGCACCTGATGATCCCACCCTTCCACAACCGTGGAAGGGGTTGATTGATGGCAGCACTGGTCTGTTATACTATTGGAATCCTGAAACCAATGTTACACAGTATGAAAAACCAGCTACAATAACCCCGCCCGTGCCTTCGGGCCCTGCGCCGGTGGCTTCTGCGCCAAGCCTGGCACCTATTCCAGCAGCTCACACAATGCAGCCTGCTGGGATAGTGCAACAGCACGGGCAACAGTTGCTGCAAGTGCAACCCTCACAACAGCAAGTGGGTCATCTTGCCCAACAGCCCGGGCAATTGATGCCGCAGCAGAGTCCCCATGTGGCACAGGTCCATCAGCAACCATCTTCTCAGGGCCTGCAGAATGTGTCACAGCAGAACTCACAGATGGCACAATCAGTGCTGCAGCCTGGGTTACATCAAGCCAGGCAACAAATGATGCAGCCTCAAGGACAGCAAATGCATCATCAGATGCCGCCACAGACAATCCATTCCCAGCATTTTGGGCAAGGCACACCTCAGGATCATGGCTCGCATTTTGTACAGCAGCAGGCACATCAATTCACGCCCCAAAACATGCATTATATGTCGTATCAGCAAAATGTGAATACACCTAGGCAACCAAACTCCCAGCACATTCAGCCAAACATGGTCTCACCCGGGCAACCTAACTCCCAGCAGGTTCAGCATAACATGCATGGTCAGCCCTTTGAAAATCAACAAAGTGCATTTCCCAAGGTAGAGGAAGTGGAGTTTAAAAATGGAAGCCAGGTTGGACATTCGCCATCTCAGTACCCACAAAGGAGTGCCTTATCTTTTCAGAACAACCAGAACATTCCTGCTGAAGTTGGTTCTAGTGAAGTGCCTAATGTAAGTGTCAATGCTGGTCAACCACAACAATTCAGGGCCTTATCAGGCAGTATGCAACAGTCACCCTCTGCAATGTCACTGCAGCAAGGTGGATCTGATTTATTTTACCAACATGGTCCTAACTTTCATAATCAAATGAGCCCAGGAATGATGCATGGTCATCCATCCAATGTCCATCCTGCTAGCCAAAAGGTGGGTCATGAGGATAATTTATATGGTAGAGCTGAGAATGAATATTTCTATAATTCTAACAAAGATATGTCAACAATGGGTCGTCAGCAGCCAAATATGACCATTCCTAGAAATCAACAGGATATGAGGACTGGAAATGCTCCTTTTCAAACTGCAATGCCTAGTGTAAATGGAAGTGGTATTGCTGGGAATGCTATGCATAGCATGTTTGCTCCTCCAATAGGAGGACCTTCACCTCACACTACTAACTCTTTGATGAGGCCTCCTTATATAGGATCTTCAGATGTTACAGATCTCTCACCAGCTGAAATTTATTGTCAGCAACATGAAGTTATAGCAACGGGTGATAACATTCCACCTCCTTTCATGACATTTGATGCTAGTGGGTTCCCTCCAGAGATTTTGAGAGAGCATTGCATGCATTGGTGCTTCCTAGGAAAGAAATGGTTTTACTCCTTTCCCCCATTGTGCGATATCTGCTCCAGTGCAGGAGCATATGTCGTACGCTGCACTGCTAATCTGCTATTGGCACAATTACACATATATTCTGCTGGCTTCTCAAATCCAACACCCATACAGGCTCAAACATGGCCCGTTGCACTACAAGGTAGAGACATAGTAGCAATTGCCAAAACGGGCTCTGGGAAAACATTAGGCTACTTAATCCCTGCCTTCATTCTTCTTAGACAGCGACGTAATAATTCTCTAAATGGCCCCACTGTCTTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATCCAGGATGAGGTCATCAAATTTGGTCGATCATCTCGAGTCTCTTGCACGTGCTTGTATGGTGGAGCACCTAAAGCCCTTCAACTAAAAGAGTTAGATCGGGGAGCAGAAATTGTTGTTGCCACACCCGGTCGGCTCAATGATATACTTGAAATGAAGAAAATTGACTTTGGGCAAGTTTCACTCCTTGTGCTTGATGAGGCTGACCGAATGCTTGATATGGGTTTTGAGCCTCAAATTCGTAAGATTGTGAATGAGATTCCACCACACAGACAAACTCTCATGTACACAGCAACCTGGCCAAAAGAAGTAAGAAAAATTGCTGGCGATCTTCTTGTTAATCCTGTCCAGGTTAACATTGGAAGTGTAGATGAGCTTGTTGCAAATAAAGCAATCACACAGTGGAAGCAAACTGTGTTCCAAGCAAACTTTACCTATAATGCTGAAGGTTTGAATCTTGGAGTCGTCACTCTGAGAAAGGGTTTACCTAACCACCATCCCTAG 2367 0.4622 MAMEEATSVGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPATITPPVPSGPAPVASAPSLAPIPAAHTMQPAGIVQQHGQQLLQVQPSQQQVGHLAQQPGQLMPQQSPHVAQVHQQPSSQGLQNVSQQNSQMAQSVLQPGLHQARQQMMQPQGQQMHHQMPPQTIHSQHFGQGTPQDHGSHFVQQQAHQFTPQNMHYMSYQQNVNTPRQPNSQHIQPNMVSPGQPNSQQVQHNMHGQPFENQQSAFPKVEEVEFKNGSQVGHSPSQYPQRSALSFQNNQNIPAEVGSSEVPNVSVNAGQPQQFRALSGSMQQSPSAMSLQQGGSDLFYQHGPNFHNQMSPGMMHGHPSNVHPASQKVGHEDNLYGRAENEYFYNSNKDMSTMGRQQPNMTIPRNQQDMRTGNAPFQTAMPSVNGSGIAGNAMHSMFAPPIGGPSPHTTNSLMRPPYIGSSDVTDLSPAEIYCQQHEVIATGDNIPPPFMTFDASGFPPEILREHCMHWCFLGKKWFYSFPPLCDICSSAGAYVVRCTANLLLAQLHIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLIPAFILLRQRRNNSLNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPHRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGSVDELVANKAITQWKQTVFQANFTYNAEGLNLGVVTLRKGLPNHHP 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6674g00001 788 Pfam WW domain 22 52 IPR001202 GO:0005515
Mupr6674g00001 788 SMART ww_5 21 54 IPR001202 GO:0005515
Mupr6674g00001 788 Pfam DEAD/DEAH box helicase 558 728 IPR011545 GO:0003676|GO:0005524
Mupr6674g00001 788 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 685 693 IPR000629 -
Mupr6674g00001 788 CDD WW 23 52 IPR001202 GO:0005515
Mupr6674g00001 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 548 741 IPR027417 -
Mupr6674g00001 788 Gene3D - 16 54 - -
Mupr6674g00001 788 ProSitePatterns WW/rsp5/WWP domain signature. 26 52 IPR001202 GO:0005515
Mupr6674g00001 788 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 565 739 IPR014001 -
Mupr6674g00001 788 SMART ultradead3 553 756 IPR014001 -
Mupr6674g00001 788 ProSiteProfiles WW/rsp5/WWP domain profile. 20 54 IPR001202 GO:0005515
Mupr6674g00001 788 MobiDBLite consensus disorder prediction 1 23 - -
Mupr6674g00001 788 SUPERFAMILY WW domain 14 54 IPR036020 GO:0005515
Mupr6674g00001 788 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 461 756 - -
Mupr6674g00001 788 Gene3D - 467 746 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6674g00001 Mupr-Chr6674 3961 8533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6674g00001 549 747 Eukaryotic Initiation Factors Gene Family AT3G19760 32.836 1.94e-27 114