Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6669g00003 ATGTGTAATCATCTCTGGCAGAAGCTTAAGCCAATGCTTAACCACCATATAGAGAAGCTTTCATCAAAGAAAATTGCAAGAAACCATTGCAATACAAATTTGTCTTCAAAAAAATTCACAAGCACCACAGCAACAATTACAGGTGCTAACTATGGAAGCAAAGTTGTGACACCAAAAACAAGCCCTACTCCATATATCAAGAATGGCAGTAGCCTCACCATGCATTATGTGAACAATGTCATCATCCATGGAATTCACATCAAGAAAATCATGCCTAAAGATGGCGGCATGACTAGGTACTTCTACAACCACTTTGGGTTGAGGATAAGGAGCGACAACGACTCCATCTCCCTATTTGGAGCCTCCAATATTTGGATAGATCATGTTTCTCTCTCTGACTCTGTTGACGGTTTTATCAATGTCATCATGGGCTCCATCACCATCACCATCTCAAATTTCCACATGACCAAACATAACGATATGATGCTATTTGGGGCCAGATACCAACACCAAGTAATAACGAGATAA 528 0.4015 MCNHLWQKLKPMLNHHIEKLSSKKIARNHCNTNLSSKKFTSTTATITGANYGSKVVTPKTSPTPYIKNGSSLTMHYVNNVIIHGIHIKKIMPKDGGMTRYFYNHFGLRIRSDNDSISLFGASNIWIDHVSLSDSVDGFINVIMGSITITISNFHMTKHNDMMLFGARYQHQVITR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6669g00003 175 SMART amb_all 41 175 IPR002022 -
Mupr6669g00003 175 PANTHER PECTATE LYASE 18-RELATED 56 170 IPR045032 GO:0030570
Mupr6669g00003 175 Gene3D - 22 174 IPR012334 -
Mupr6669g00003 175 SUPERFAMILY Pectin lyase-like 40 166 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6669g00003 Mupr-Chr6669 23513 25287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6669g00003 65 172 Polysaccharide Lyase AT1G14420 55.556 1.37e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6669g00003 K01728 - gmx:100785801 148.673