Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6664g00001 ATGGGATGCCTTAGAAGCCCCAAGAAAGAAGAACAAGAAGTCCCAGATGGTATCGTATTACCCAATTCTAACCAAGCTTACACTTATGAAGATTTCAATCTTTTGGATGAACTGGAAGGGGTCTTGAACAAGGAAGAACAAAATTTGGCACAACAAAACTCCTCTAGTGGCCAACTTCATTGGGATTTCATGGAATGGGAGGAATTTTCCCCCATTGGAGAAGATGAAAACGAAGGGAAAGAGCAGGTGACAGAGAACACCACCAGCAATAGCCTCTTTGAGGAGCAGCAGATAAAGAGAGAAAACGTTGTTGGGTTTTGGGAAGTTGATGATGAGAAGATGGTGGCTTTGAATTTGAACTTGAACTATCAAGAGGTTTTGGACGCATGGTCTGACCGAGGGCCTCTATGGGCTCACGATTGTTCTCTTTCATTGCCCGACAATAATGCCTATTATATGGGAGAAGTGCCAGTATTGGAAGAAGAGAGAGCAAGAAGGGAAGCAAGTGTTCTTAGGTACAAAGAGAAGCGGCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCCAGAATCAAGGGTCGCTTTGTCAAGAGACACTGA 630 0.4302 MGCLRSPKKEEQEVPDGIVLPNSNQAYTYEDFNLLDELEGVLNKEEQNLAQQNSSSGQLHWDFMEWEEFSPIGEDENEGKEQVTENTTSNSLFEEQQIKRENVVGFWEVDDEKMVALNLNLNYQEVLDAWSDRGPLWAHDCSLSLPDNNAYYMGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6664g00001 209 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 43 208 - -
Mupr6664g00001 209 Pfam CCT motif 166 208 IPR010402 GO:0005515
Mupr6664g00001 209 ProSiteProfiles CCT domain profile. 166 208 IPR010402 GO:0005515
Mupr6664g00001 209 Coils Coil 35 55 - -
Mupr6664g00001 209 MobiDBLite consensus disorder prediction 75 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6664g00001 Mupr-Chr6664 2176 3560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6664g00001 110 208 C2C2-CO-like Transcription Factor Family AT1G73870 45.763 3.85e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr6664g00001 CCT 2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6664g00001 - - gmx:100801038 342.813