Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6641g00002 ATGGTAAAGTCACGTTCTCTGACACTGCAATCTGTCTCCAACTGTACCAATCTTTTCCTATATCGAATATCCAATTCCATTTCCATTGATCTGATCTTGGCAAACCCAATCAATCTATCTATCAATCTAGTTATACTCATTCTTCTTCTACCAAAATCAAACCATGGCAGGCTTCAGCGGCGACGAAACCGCTCCTTTCTTCGGCTTCCTCGGTGCCGCTGCGGCACTCGTATGGGAGCAGCGTATGGAACTGCGAAGAGTGGGGTGGGAGTGGCATCGATGGGTGTGATGAGGCCAGAGCTTGTGATGAAGTCGATTGTGCCCGTGGTTATGGCTGGAGTGTTGGGAATTTATGGCTTGATTATTGCGGTTATCATCAGCACTGGAATAAACCCCAAGGCTAAGTCTTACTATCTCTTTGATGGCTATGCCCACTTGTCCTCTGGCCTTGCCTGTGGCCTTGCTGGTCTCTCTGCTGGAATGGCCATTGGAATTGTTGGTGATGCTGGTGTCAGGGCTAATGCCCAGCAGCCGAAGCTGTTTGTTGGTATGATTCTTATCTTGATTTTCGCTGAAGCTCTTGCTCTCTATGGCCTCATTGTGGGTATCATCCTCTCATCTCGAGCAGGCCAATCTCAAACTATGGAAATTATCGATACAATACAGACAGTAGAAGTTAAAACCATTGGTGACTCGCCTATTTTTGTTGCAATATGA 717 0.4658 MVKSRSLTLQSVSNCTNLFLYRISNSISIDLILANPINLSINLVILILLLPKSNHGRLQRRRNRSFLRLPRCRCGTRMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSQTMEIIDTIQTVEVKTIGDSPIFVAI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6641g00002 238 NCBIfam V-type ATPase subunit C 76 171 IPR011555 GO:0033179|GO:0046961|GO:1902600
Mupr6641g00002 238 Pfam ATP synthase subunit C 78 126 IPR002379 GO:0015078|GO:0033177|GO:1902600
Mupr6641g00002 238 Pfam ATP synthase subunit C 147 205 IPR002379 GO:0015078|GO:0033177|GO:1902600
Mupr6641g00002 238 SUPERFAMILY F1F0 ATP synthase subunit C 137 206 IPR035921 -
Mupr6641g00002 238 CDD ATP-synt_Vo_c_ATP6C_rpt2 139 206 - -
Mupr6641g00002 238 CDD ATP-synt_Vo_c_ATP6C_rpt1 78 130 - -
Mupr6641g00002 238 PRINTS Vacuolar ATP synthase 16kDa subunit signature 157 183 IPR000245 GO:0033179|GO:0046961|GO:1902600
Mupr6641g00002 238 PRINTS Vacuolar ATP synthase 16kDa subunit signature 184 207 IPR000245 GO:0033179|GO:0046961|GO:1902600
Mupr6641g00002 238 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 130 IPR000245 GO:0033179|GO:0046961|GO:1902600
Mupr6641g00002 238 PRINTS Vacuolar ATP synthase 16kDa subunit signature 80 104 IPR000245 GO:0033179|GO:0046961|GO:1902600
Mupr6641g00002 238 FunFam V-type proton ATPase proteolipid subunit 65 212 - -
Mupr6641g00002 238 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 77 211 - -
Mupr6641g00002 238 Gene3D - 65 213 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6641g00002 Mupr-Chr6641 6276 9119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6641g00002 78 214 Primary Pumps ATPases(2) AT4G38920 98.540 5.99e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6641g00002 K02155 - qsa:O6P43_019763 237.654