Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr663g00008 ATGGAAGAGGCAGAGGAGTCCACCAATGCTAACCAGAAATTTACCACCAAAAGAAGGAGCTTAAGGAATGGAGGCAACTCTCATGAACATCATCATTATCATCATCATCACCACCATCACCATCATCATCACTATCAGCACCACCATCATCAGCTGCTACAATACTCAACTCAGCTTGGCTTCTGCAACAACCAGAACAAGTATCAGAGATACTATCCAGCTCTTCTTCCTCTACCTTCTCTTATACCTCTACAACAACTTCCTCTAACTCCACCCTTCCCTCAAAATCACATCATCAAATCAAAAACCCATTTGCACAAACCTCCATGCAAACTCAATAGCTCCCCCTCCTCAGATTACAAGCTCCCTCAACCACCACTTGCTCCTGCTCCAAAGGAACTTCAGCTGCAAACTAAGGCATCCTTTAGGGGAGATGATGAGAAGAAATTGATTCCAGCAAGGAAGCCACAGGCAGTAATTGTTGCAAGGAGGCCAGACTCTGGTGGCCAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTACAATTTGATCCATCACAAAAGATATATCATTACAATGTTGAAATCACTCCTCATCCCTCCAAGGATGTTGCAAGAGCAATTAAACAGAAGTTGGTAAATAACAATTCAGCAGTGCTCTCAGGTGCTGTTCCGGCATATGATGGGAGGAAGAATCTTTATAGTCCGGTTGAATTTCAAAATGATAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAACAAGTTGACGCCGCCTTATGGAGAAATGTGTGACTTGAAAGAGAAGCATGAACAGCTTAAACTGTTCAGGATAAATATCAAACTAGTCTCAAAGATCAATGGGAAGGAGTTGAGTAACTACTTGAGCAAAGAGGGTGATGACTGGATTCCACTTCCACAGGACTATCTACATGCTTTGGATGTAGTTCTTAGGGAGAGCCCAACTGAGAAGTGCATACCTGTAGGGAGGTCATTCTATTCGAGTTCAATGGGAAGAAGCAAAGATATTGGTGGAGGAGCTGTTGGAATGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAATGTGGATTTCTCAGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCATACCTGCAGAAGCGCCTTGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAACTCAATTAACTGGCGAAGAGAGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTTGTTTGCCATAGGGAAACTGTTCAGAGATACCGCGTCTATGGCTTAACCGAGGAGGCTACTGAAAACCTTTGGTTTGCTGGCAGAGACGGAAAGAATCTGAGGCTGGTGAATTACTTTAAAGATCACTATAATTATGACATACAATTCAGAAAATTGCCATGCTTGCAAATTAGTAGGAGTAAGCCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAGAAGTTCCTCGGGAAACTGTCTGATGATCAAACGGCAAGAATACTCAAAATGGGCTGCCAAAGGCCAGGAGAACGCAAAACCATCATTGAAGGAGTCATGAGAGGAACTGTTGGGCCTACCAGTGGTGACCAGGAAAAAGAATTCAAACTTCAAGTCTCAAGGGAAATGACAAAGTTGACTGGTAGAATTCTTCATCCTCCAAAACTGAAGCTTGGAGATGGAGGTCATGTGAGAAACCTGACTCCTTCGCGTCACGACCGCCAATGGAACCTTCTTGATGGCCATGTCTTTGAAGGAACTAAAATTGAAAGGTGGGCACTAATTAGTTTTGGCGGCACACCTGAGCAGAAGTCCAACGTCCCCAGATTCATAAACCAGTTATCTCAAAGGTGTGAACAATTGGGCATTTTTCTCAACAAGAACACAGTTATTAGTCCTCAGTTTGAATCAAGCCAGATTCTTAACAATGTCACACTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAGAAAACACAAAGGGTATGCCGACTTGAAACGAATTGCCGAGACAAGTGTCGGTGTTGTAAGCCAATGCTGCCTCTACACCAATCTCAACAAGTTGAGTTCACAGTTTTTGGCTAACTTGGCCCTAAAAATCAATGCCAAAGTTGGTGGATGCACAGTGGCCTTATACAACTCATTGCCTTCTCAGTTACCACGCCTATTTCATATAGACGAGCCGGTGATATTCATGGGTGCAGACGTGACACATCCTCACCCTCTTGATGATTTCAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCAACAGCAAACAAATACATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATCATCCAGGATCTTGGTGCAATGGTGGGGGAATTGCTTGATGACTTTTACCAGGAGGTAGAGAAACTCCCCAACAGAATCATTTTCTTCAGAGATGGGGTTAGTGAAACTCAGTTTTACAAAGTGCTGCAAGAGGAATTACAATCCATCAGGTGTGCATGTTCAAGGTTTCCTGATTACAAACCTCTAATTACTTTTGCAGTTGTGCAAAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGACCAGTCTTCAACTCAAAACCATTTTCTCTATGAAAACATTCCTCCAGGGACTGTGGTTGATTCTGTGATCACTCATCCAAAGGAATTTGACTTCTATCTCTGTAGCCATTGGGGTGTGAAAGGCACAAGCAGGCCAACTCACTACCATGTCTTGTGGGATGAAAACCAGTTTACCTCTGATGAACTACAGAAACTAGTTTACAACTTATGCTACACTTTTGTAAGGTGTACCAAGCCAATTTCTTTGGTGCCTCCTGCATATTATGCACATTTAGCTGCATATAGAGGCAGACTCTACCTTGAGAGATCAGAGTCCTTAGGTTTGTACAAAAGTACATCTACACTATCAAGAGCTGCTCCTCCTAAGACAGCACCTCTACCTAAACTTAGTGAAAATATCAAGAAGCTA 3069 0.4308 MEEAEESTNANQKFTTKRRSLRNGGNSHEHHHYHHHHHHHHHHHYQHHHHQLLQYSTQLGFCNNQNKYQRYYPALLPLPSLIPLQQLPLTPPFPQNHIIKSKTHLHKPPCKLNSSPSSDYKLPQPPLAPAPKELQLQTKASFRGDDEKKLIPARKPQAVIVARRPDSGGQEGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDVARAIKQKLVNNNSAVLSGAVPAYDGRKNLYSPVEFQNDKLEFYISLPIPTNKLTPPYGEMCDLKEKHEQLKLFRINIKLVSKINGKELSNYLSKEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAVGMRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTQLTGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFAGRDGKNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIIEGVMRGTVGPTSGDQEKEFKLQVSREMTKLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTKIERWALISFGGTPEQKSNVPRFINQLSQRCEQLGIFLNKNTVISPQFESSQILNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYTNLNKLSSQFLANLALKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLQEELQSIRCACSRFPDYKPLITFAVVQKRHHTRLFPFETDQSSTQNHFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLYKSTSTLSRAAPPKTAPLPKLSENIKKL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr663g00008 1023 SUPERFAMILY PAZ domain 377 535 IPR036085 GO:0005515
Mupr663g00008 1023 CDD PAZ_argonaute_like 386 498 - -
Mupr663g00008 1023 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 155 989 - -
Mupr663g00008 1023 Pfam Piwi domain 679 985 IPR003165 GO:0003676
Mupr663g00008 1023 SUPERFAMILY Ribonuclease H-like 663 988 IPR012337 -
Mupr663g00008 1023 Pfam PAZ domain 393 515 IPR003100 GO:0005515
Mupr663g00008 1023 Pfam Argonaute linker 1 domain 331 380 IPR014811 -
Mupr663g00008 1023 SMART DUF1785_2 330 382 IPR014811 -
Mupr663g00008 1023 MobiDBLite consensus disorder prediction 1 51 - -
Mupr663g00008 1023 SMART Piwi_a_2 678 988 IPR003165 GO:0003676
Mupr663g00008 1023 Gene3D paz domain 376 503 - -
Mupr663g00008 1023 FunFam Protein argonaute 7 377 503 - -
Mupr663g00008 1023 FunFam Argonaute 10 564 740 - -
Mupr663g00008 1023 MobiDBLite consensus disorder prediction 28 50 - -
Mupr663g00008 1023 ProSiteProfiles PAZ domain profile. 390 499 IPR003100 GO:0005515
Mupr663g00008 1023 ProSiteProfiles Piwi domain profile. 678 988 IPR003165 GO:0003676
Mupr663g00008 1023 SMART PAZ_2_a_3 390 521 IPR003100 GO:0005515
Mupr663g00008 1023 CDD Piwi_ago-like 547 987 IPR045246 -
Mupr663g00008 1023 Gene3D - 564 740 - -
Mupr663g00008 1023 Gene3D - 750 1023 IPR036397 GO:0003676
Mupr663g00008 1023 Pfam N-terminal domain of argonaute 175 321 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr663g00008 Mupr-Chr663 46752 51499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr663g00008 169 1023 Eukaryotic Initiation Factors Gene Family AT1G48410 41.723 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr663g00008 K11593 - gmx:100797755 1888.23