Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6636g00001 ATGGATCCTGGTCGCTATGCTCTGCATCAAGGCTGGGATAATAATAACAGCCTTATTCTCTTGAATCCACAGGCTCTTGAGGGATACGGTGCAGTCCACGAGCCCAACTTCCGGGTTGGTGGTTCATATGATGAAAGACGATTTATTGATGAAAGATATCCAAGGGATGCTGTTTACCAGAGAAATGATTTCCACCGTGACATTTTGGATAGGGAGGCCTATCTGCCGCCAGGACCTCCTGTTGGCCACTGGAGTCAATCCAAACGTAGAGGTTATGATGAAGACTATCCACTTGACAGGGAATCTAGACGTTTTCAGAGGCCCTATCATGAATCATATAATCAGATTGATGGTTTCAGGGATCGTGAAATTGACACCTACCCAGAATATGAAAGGTTTCGGGATGGCTATACCAGCATTGAAAACTACAGTGATCGAGGATATGAAAAACCTGCCAGGTTTGTAGGACATGACCGTGATGATTATGCATATGATGATTATGACTACAAGTCCCGGGCTTCCTCTCATCATCGCCGGGAGGATAGCCACGAGAGGGACTATGATCATGGTCATCATAGTTATGATTCTGATTATGAAAGAGGTAGTAGAAGAGATAGTAATTGGAGGCGACGTGAATCTCGTGATCGGGAACGAGATAAAAGAGGTCATAGTCGAGAAAGAGATCTGAGTCCACATAGGAGGCATGAGCGTTCTCGTTCACATTCTCGTTCTCGTTCACGTTCTCGATCCCGGTCCCATTCTCATTCCCATTCTCATTCCCGATCTCAATCTCATGGATATGATGACCATCCAAGATCCAGGTCCCCTCGAGGTCGAAGCCATGGTCGAAGTTATAGGGAAGATAGCTATACCGATAGTCGATATGATAAAAGTGAAAGGCGTAGGGATCGTGATGATAAACGTCAGAGGGAGCAATATTCTGTGGCTCCATCTGCAACTGTCGTTGTGAAAGGTCTTTCACAGAAGACAACTGAAGAAGATCTATACCAAATCCTTACGGAATGGGGCCCCCTCCGTCATGTTCGTGTTATAAAGGAGAGAAATTCTGGCATCTCCCGTGGATTTGCTTTTATTGATTTTCCTTCTGTGGGGGCCGCACAAGGAATGATGGACAAACTAGGAGATGATGGTCTTGTTGTGGATGGCAGAAAACTTTTTTTTGAATATAGTAGTAAGCCAACTGGAGGTCCTGGTCCAGATGGAGCTATGAAATCAGGTCATAATTATAAGAGCATTACGGTTCCATCTGATTGGATGTGCACTATATGTAGCTACATAAATTTTGCACGCCGGACTTCCTGCTATCAGTGTAATGAGCCACGAACTGATGATGCTCCTGCAGCAGATATTTCATTATCAAATTCAGCAGCTATAGGAAAGAAAGGTTTGGAGGCAGTATATGTGCAATCAGGTCCAACTCATGTTTTGGTTGTCCGTGGATTGGATGAAAATGCCGATGAGGAAATGCTCCGCTATGAGTTTTCCAAACATGCTCCAATTAAGGATCTGCGTCTTGTGCGAGACAAGTTTACTCATGTCTCGAGGGGATTTGCATTTGTACACTTTTATTCGGTGGAGGATGCTACCAAAGCTCTTGATGCAACAAATGGAACAATGCTTGAAAAGAATGGACAGATTCTAAGAGTGGCATATGCAAAAAGTATCCTGGGCCCTGGATCAGGAACATCAGGAACTTCCCAATCAAGCAGTCTTGCAGCTGCCGCGATTGAGGCTGCAACATTTGCCCAACAGTATGATTCTGTGGGATGGGCTCCAAAAGAATACAATCCAGATGACAAACAATCTACTGGTCCAGAGCAAACTGGCACAGAAGTTGGTGCTCCACAATCAGGCTTTGTTTGGGATGAAGCATCTGGTTATTACTATGATGCTGCTTCTGGGTTTTACTATGATGGAAATACTGGTCTTTACTATGATGGTAATAATGGGATTTGGTATTCATATGACCACCAAACTCAGCAGTACATACCTTGCACAGATCAAAATCAGAATAAAACATCTAATAATGAGTCTGAACCTTCCAAGGCATCTGATGGTTCCGGAAGTAAAAAGGTCATTTCTGCACCAGCTACTACAGTTACATCAGTTGAGAAGCCAGCTTCATTGGCAGATGCTGTCCAGGCTGCAGCAACTGCTGCTTTAGCTGCAGAGAAGAAAGAAAAAGAAAAATCAAAGGAAATAAAACTTGCCTCAAAAAGCAGTATTCTGGCAAACAAGAAAAAGATGAACAATGTGTTGACAATGTGGAAGCAGAGAAGCCATGAGGGGCAGGCTACTCGAGTGGCTCTGGAAGACAATCAACCTTCTGTTTCAGCCGATGAAAGGTCATATTCTTCTGGACACTCTGCAAAGAATAAGTTAAAAAATGAGACAATGGTAAGGGAAAGTAATGCCTCTAATGTAGGAATTCACACAACTCTTGCCCAGGTTGCTGCTATTGATTCTCAGGCACAGCCACGGCCTGTTAGTAATAGCCTTGGAGGCACTGTGATGGGGGTTATAAGGGGCTCAGGAAGAGGGGTTATTAAATCAGATACTTATTCAGGTTCTTCATCTGTTGCATCATCTATACCAAGTTCATCTTCAGCAAATATTGATGCACAGACAGTTGCTACTCCTTTTAGAACAGATGTGTCTGCCCTGGGTTCATATACACCATCTGCAACTGTTGGAAGTGGTCGAAGAAGATTTTCAGAAATGCCTAATTCTGCTTCAGCTCAAAAGGAACAATCTCATACAACTTACAGGGATCGTGCAGCTGAGAGGAGGAGTTTGTATGGCTCATCATCTTCTGTTGGAAATGATTTTGCTGACCTTGAAATTGGGGATTCAAATCGAGATTTTGCATCAAGAAAGGGTGATCCAATGCCATTCCCTCCTGGGGTTGGTGGAGGACGCATAGTTGGAGATGTCAACCTTGATACTTTTGAGGTGATTACGGCAGACAAAGCAATTGATGAAAACAATGTCGGTAATCGGATGCTTCGCAACATGGGCTGGCAGGAAGGATTGGGACTAGGAAAGGATGGAAGTGGAATGATAGAGCCTGTCCTGGCACAAGCCACGGAAAATAGGGCAGGACTTGGGAGTCAACAGAAGAAGTTGGATCCTAGCCTTGAGGTGCAGGCAGGGGACAGTTACAAGATGCTTATTCATAAAAAAGCACTTGCCAGGTTTCGGGAGATGTCAGAAAGTTAA 3240 0.441 MDPGRYALHQGWDNNNSLILLNPQALEGYGAVHEPNFRVGGSYDERRFIDERYPRDAVYQRNDFHRDILDREAYLPPGPPVGHWSQSKRRGYDEDYPLDRESRRFQRPYHESYNQIDGFRDREIDTYPEYERFRDGYTSIENYSDRGYEKPARFVGHDRDDYAYDDYDYKSRASSHHRREDSHERDYDHGHHSYDSDYERGSRRDSNWRRRESRDRERDKRGHSRERDLSPHRRHERSRSHSRSRSRSRSRSHSHSHSHSRSQSHGYDDHPRSRSPRGRSHGRSYREDSYTDSRYDKSERRRDRDDKRQREQYSVAPSATVVVKGLSQKTTEEDLYQILTEWGPLRHVRVIKERNSGISRGFAFIDFPSVGAAQGMMDKLGDDGLVVDGRKLFFEYSSKPTGGPGPDGAMKSGHNYKSITVPSDWMCTICSYINFARRTSCYQCNEPRTDDAPAADISLSNSAAIGKKGLEAVYVQSGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALDATNGTMLEKNGQILRVAYAKSILGPGSGTSGTSQSSSLAAAAIEAATFAQQYDSVGWAPKEYNPDDKQSTGPEQTGTEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQNQNKTSNNESEPSKASDGSGSKKVISAPATTVTSVEKPASLADAVQAAATAALAAEKKEKEKSKEIKLASKSSILANKKKMNNVLTMWKQRSHEGQATRVALEDNQPSVSADERSYSSGHSAKNKLKNETMVRESNASNVGIHTTLAQVAAIDSQAQPRPVSNSLGGTVMGVIRGSGRGVIKSDTYSGSSSVASSIPSSSSANIDAQTVATPFRTDVSALGSYTPSATVGSGRRRFSEMPNSASAQKEQSHTTYRDRAAERRSLYGSSSSVGNDFADLEIGDSNRDFASRKGDPMPFPPGVGGGRIVGDVNLDTFEVITADKAIDENNVGNRMLRNMGWQEGLGLGKDGSGMIEPVLAQATENRAGLGSQQKKLDPSLEVQAGDSYKMLIHKKALARFREMSES 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 673 699 - -
Mupr6636g00001 1079 SUPERFAMILY RNA-binding domain, RBD 478 568 IPR035979 GO:0003676
Mupr6636g00001 1079 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 481 561 IPR000504 GO:0003723
Mupr6636g00001 1079 SMART G-patch_5 999 1045 IPR000467 GO:0003676
Mupr6636g00001 1079 Gene3D - 419 451 - -
Mupr6636g00001 1079 ProSiteProfiles Zinc finger RanBP2 type profile. 421 450 IPR001876 -
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 171 235 - -
Mupr6636g00001 1079 Pfam G-patch domain 1002 1043 IPR000467 GO:0003676
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 261 312 - -
Mupr6636g00001 1079 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 319 399 IPR000504 GO:0003723
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 71 93 - -
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 779 800 - -
Mupr6636g00001 1079 Pfam OCRE domain 623 671 IPR041591 -
Mupr6636g00001 1079 ProSiteProfiles G-patch domain profile. 1001 1047 IPR000467 GO:0003676
Mupr6636g00001 1079 CDD RRM1_RRM2_RBM5_like 479 559 - -
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 900 924 - -
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 171 316 - -
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 597 624 - -
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 900 932 - -
Mupr6636g00001 1079 CDD OCRE_SUA_like 620 672 IPR035623 -
Mupr6636g00001 1079 SMART rrm1_1 320 395 IPR000504 GO:0003723
Mupr6636g00001 1079 SMART rrm1_1 482 557 IPR000504 GO:0003723
Mupr6636g00001 1079 SUPERFAMILY Ran binding protein zinc finger-like 416 451 IPR036443 -
Mupr6636g00001 1079 Gene3D - 471 608 IPR012677 -
Mupr6636g00001 1079 Gene3D - 284 418 IPR012677 -
Mupr6636g00001 1079 SMART zf_4 423 447 IPR001876 -
Mupr6636g00001 1079 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 321 380 IPR000504 GO:0003723
Mupr6636g00001 1079 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 483 549 IPR000504 GO:0003723
Mupr6636g00001 1079 MobiDBLite consensus disorder prediction 236 260 - -
Mupr6636g00001 1079 ProSitePatterns Zinc finger RanBP2-type signature. 425 444 IPR001876 -
Mupr6636g00001 1079 PANTHER RNA-BINDING PROTEIN 210 1074 - -
Mupr6636g00001 1079 SUPERFAMILY RNA-binding domain, RBD 308 404 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6636g00001 318 545 Eukaryotic Initiation Factors Gene Family AT2G36660 24.000 5.67e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6636g00001 K13094 - gmx:100777686 1791.55