LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr6635g00001	AATAAAATATTATGCAAAGCAAGGAAAGCAAAAAGCAGGGTTGAATATGAGAGGAGAGAAACACGGTTGATCCCTGTAGGCCAGGTTTGTCATACCAATAATGAGAAAAGAAAAAAAGAATCAGAAAATGAACAAGACCGGTACCGCACGCCCAGGCCCACTAAGCTAAACCCAACCCGAGTGCAGCTTGGCATAAATACCGCACAACCACCCCCTCCTTTCTCTCCAAATATCTCTTTCTGTAATTTCTATGACCAGTACTTGCGGACTATGTTAATGGAGACTGCTGGCCGCGATTCGGGAATGAGTTCAGAGACAGTGAATTCCACTTCAATGAGCAACGAAAGCGTTTGCAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCCCCCGTCCTTGTCCTCGCCGGAGAGTCTCTTTGTCAAGCCCCACCGCTCCTCCGACTTCGCCTACTCCGCCATCCTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGGCGAATCGGCGCGGGCGATATCGGGACCGTGTACCTGTGCCGGCTCCGTGACGGGGACTTGGACGACGACCCGGCGTGCCTCTACGCTATGAAGGTGGTGGACAAGGAGGCGGTGGCGCTGAAAAAGAAGGCACAGAGAGCGGAAATGGAGAGAAAGATTCTGAAGATGGTGGACCACCCCTTCCTCCCAACGCTCTATGCGGAGTTCGAGGCTTCGCATTTCTCTTGCATTGTCATGGAGTATTGTTGTGGTGGGGACTTGCACTCCCTTCGACACAACCACCCTAACAACCGCTTCTCTCTCTCCTCTGCTAGGTTTTACGCGGCTGAAGTACTGGTGGCATTGGAGTATCTCCACATGCTGGGAATCATCTACAGGGATCTAAAGCCGGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTTGATCTCTCTCTATGCTCTGATGCAATACCAGCCGTCGAATCCCCTGACACTTCGCGAGATCCTGCATTACCACCCGCGTTACCCTACACTCGCCACCACTCCACCCCCTTCTCGTGCCTCTCCAACCGCGTGTTTCGGTCCAGGAAGGTGCAGACCCTTCAACCGAACCGCCTCTTCGTGGCCGAACCGGTCGGGGCCCGCTCCTGCTCCTTCGTGGGGACGCACGAGTACGTGTCGCCGGAGGTGGCCTCCGGGAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTCGGGATATTCATCTACGAGATGGTGTATGGTCGCACCCCCTTCTCGGGCCCATCCAACGAGGCTACGCTGCGCAACATCATAAAAAAGCCCCTCGCCTTTCCCACTGCCACGCCCTCCAGCACGCTTGAAATGCACGCGCGGGACCTCATCTCCTGCTTGCTTAACAAGGACCCGAACCGCAGGCTCGGGTCCAAGCGAGGCGCAGCGGACGTCAAGAAGCACCCCTTCTTCGCGGGGCTCAACCTGGCGCTCATACGAATGGTAACGCCGCCGGAGGTTCCGTCACTCAGAAAGCACAAAACGACGCCGTTCTACCACGTTAACGATAACGGCAGCGTAAATAACAGTACACAGCAACTAACGCCGTTTGATTACTTTTGA	1620	0.5537	NKILCKARKAKSRVEYERRETRLIPVGQVCHTNNEKRKKESENEQDRYRTPRPTKLNPTRVQLGINTAQPPPPFSPNISFCNFYDQYLRTMLMETAGRDSGMSSETVNSTSMSNESVCSTSFSRLSFDLPPSLSSPESLFVKPHRSSDFAYSAILRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRDGDLDDDPACLYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCCGGDLHSLRHNHPNNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPDTSRDPALPPALPYTRHHSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFSGPSNEATLRNIIKKPLAFPTATPSSTLEMHARDLISCLLNKDPNRRLGSKRGAADVKKHPFFAGLNLALIRMVTPPEVPSLRKHKTTPFYHVNDNGSVNNSTQQLTPFDYF	539

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr6635g00001	539	SMART	serkin_6	166	490	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6635g00001	539	SUPERFAMILY	Protein kinase-like (PK-like)	148	518	IPR011009	-
	Mupr6635g00001	539	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	293	305	IPR008271	GO:0004672\|GO:0006468
	Mupr6635g00001	539	FunFam	serine/threonine-protein kinase D6PK-like	382	508	-	-
	Mupr6635g00001	539	FunFam	protein kinase PINOID	252	320	-	-
	Mupr6635g00001	539	MobiDBLite	consensus disorder prediction	32	53	-	-
	Mupr6635g00001	539	FunFam	protein kinase PINOID 2	164	251	-	-
	Mupr6635g00001	539	Coils	Coil	200	220	-	-
	Mupr6635g00001	539	PANTHER	FLIPPASE KINASE 1-RELATED	45	510	-	-
	Mupr6635g00001	539	Pfam	Protein kinase domain	385	490	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6635g00001	539	Pfam	Protein kinase domain	166	319	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6635g00001	539	MobiDBLite	consensus disorder prediction	27	58	-	-
	Mupr6635g00001	539	Gene3D	Phosphorylase Kinase; domain 1	164	251	-	-
	Mupr6635g00001	539	Gene3D	Transferase(Phosphotransferase) domain 1	383	508	-	-
	Mupr6635g00001	539	Gene3D	Transferase(Phosphotransferase) domain 1	252	319	-	-
	Mupr6635g00001	539	ProSiteProfiles	Protein kinase domain profile.	166	490	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr6635g00001	Mupr-Chr6635	2658	5354	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr6635g00001	91	539	AGC Kinase Gene Family	AT2G34650	66.887	0.0	585

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Mupr6635g00001		Pkinase	2.6e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr6635g00001	-		-	gmx:100795536	770.385