Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6629g00002 ATGGATGATGGCCGCCAACATGAAAATGGCAGGCATAAGATGGAATACTACAGAGGAGCACATTCCCTGTGGAATACTGATTCCCAGCATCAAGTAAAAGAGCCAAATGCACTAGTTATGAATAAGAAGATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTTTAGAAATCGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGGGATGCAGCCATTCGGCAGAGGGATGAAGCAATTGCTCAGAGGGACAATGCCCTTTTGGAACGGGACAATGCCCTTGCGGCCCTTCAGAGTCGGAGTAATTCTGTCAACTTCCCATTTGGCGGTGGAATTCAATGCGGATCAAAACGGATGCACCATTCTTCAAACCATCTATTCAACATGACTGAAGCTGCATACAGCACAAAGGATATGATAATAAGGGATGCCTCCCCAGTAACTGTTATACCATGTGAAGCTGTCAAATCTCATCAAGCAAAGAGAACAAAGGAGAACAAGGTAATTAATTCTAAGGCGTCAAAGCCACCCTGCAAAGTAAAGAAAATGGGGGAGGATTTAAATAGGCAGGCTTCTGAAGGGACAAAGATCAGATCTGAATGGGACAGGCAGGATGTTGGCCTGAATTTGGTTGCATTTGACGAAACTATCATGCCAGTTCCAGTTTGCACATGTACCGGCGTACCACGACAGTGCTACAAATGGGGGAATGGGGGATGGCAGTCATCGTGTTGTACCACGACATTGTCAATGTATCCACTACCACAGCTTCCAAACAAGCGCCATGCCCGCATTGGAGGACGAAAGATGAGCGGAAGTGTCTTTACAAGACTTCTCAGTAGGTTGGCATCAGAAGGCCACGATTTATCTATACCATTGGATCTTAGGGAATACTGGGCCAGACATGGAACAAATCGCTACATCACTATC 945 0.4593 MDDGRQHENGRHKMEYYRGAHSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILEIELEAAISEKNEALAARDAAIRQRDEAIAQRDNALLERDNALAALQSRSNSVNFPFGGGIQCGSKRMHHSSNHLFNMTEAAYSTKDMIIRDASPVTVIPCEAVKSHQAKRTKENKVINSKASKPPCKVKKMGEDLNRQASEGTKIRSEWDRQDVGLNLVAFDETIMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLASEGHDLSIPLDLREYWARHGTNRYITI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6629g00002 315 SMART GAGA_bind_2 1 315 IPR010409 -
Mupr6629g00002 315 Pfam GAGA binding protein-like family 1 315 IPR010409 -
Mupr6629g00002 315 PANTHER - 1 315 IPR010409 -
Mupr6629g00002 315 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6629g00002 Mupr-Chr6629 8983 10175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6629g00002 1 315 BBR or BPC Transcription factor family AT2G21240 57.862 1.19e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mupr6629g00002 GAGA_bind 3e-100 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6629g00002 - - gmx:100813103 601.282