Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6623g00002 ATGGATGCTGAAGACTACTACAAGATACTGAAGGTGAAGCGTGATGCGACAGATGAGGAGGTGAAAAAGGCTTATAAGAGGTTGGCCATGAAATGGCACTTGGATAAGAACCTTGAAGACCCTATTAGAAGAGAAGAGTTTGAGGCCAAATTTAAGCAGCTATCTGAGGCCTATAACGTGCTCCGTGATCCCAAGAAGCGTCAGATTTATGACTTCTACGGTCACTATCCCCTTGACTCTCGGCGCTTCAACAAAGAAAATGGTGCTGGGAATGTGAAGGAAGCTGGCCTGGTTGAGAGGAGCTTGACTTGTACCCTTGTGGAGCTTTACAACGGTTGCAAAAAGATGTTCAAGGTCTCAAGGATTGTTCCAAATGAATTTGGAGAGGTAAAGTTTGTAGAAGAAATCTTGAAGATAGATATTAGACCTGGTTGGAAGAAGGGCACAAAAATCACTTTTCCTGGGAAGGGCAACCAAGAACCGGGAAGTGCTCGTGCTGATCTAGTTTTTGTGTTGGATGAGAGACCTCATGCTATTTTCAAGAGGGATGGAAATGATTTAGTAGTGACCCAGAAGATATTACTTGTAGATGCTCTCATAGGAAAGACTCTCAACTTGACTACCTTAGATGGAAGAGATCTCACAATCCACGTGACCGATATTGTGACACCAGGCTATGAGCTGGTGGTCCCAAATGAGGGCATGCCCATCTCAAAGGAACCTGGCAAGAAAGGAAACCTCAGAATCAAGTTTGATGCTATGTTTCCTTCAAGGCTGACCACACAACAGAAGTGTGATCTAAGAAGGATTCTGAGTGATGCTGATTAA 828 0.4396 MDAEDYYKILKVKRDATDEEVKKAYKRLAMKWHLDKNLEDPIRREEFEAKFKQLSEAYNVLRDPKKRQIYDFYGHYPLDSRRFNKENGAGNVKEAGLVERSLTCTLVELYNGCKKMFKVSRIVPNEFGEVKFVEEILKIDIRPGWKKGTKITFPGKGNQEPGSARADLVFVLDERPHAIFKRDGNDLVVTQKILLVDALIGKTLNLTTLDGRDLTIHVTDIVTPGYELVVPNEGMPISKEPGKKGNLRIKFDAMFPSRLTTQQKCDLRRILSDAD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6623g00002 275 Pfam DnaJ domain 5 71 IPR001623 -
Mupr6623g00002 275 Gene3D - 97 175 - -
Mupr6623g00002 275 SMART dnaj_3 4 66 IPR001623 -
Mupr6623g00002 275 SUPERFAMILY HSP40/DnaJ peptide-binding domain 180 264 IPR008971 GO:0006457|GO:0051082
Mupr6623g00002 275 Pfam DnaJ C terminal domain 99 256 IPR002939 -
Mupr6623g00002 275 CDD DnaJ 5 63 IPR001623 -
Mupr6623g00002 275 CDD DnaJ_C 98 259 - -
Mupr6623g00002 275 Gene3D - 177 257 - -
Mupr6623g00002 275 FunFam DNAJ heat shock family protein 176 271 - -
Mupr6623g00002 275 SUPERFAMILY Chaperone J-domain 1 81 IPR036869 -
Mupr6623g00002 275 Gene3D DnaJ domain 1 95 IPR036869 -
Mupr6623g00002 275 FunFam Dnaj homolog subfamily b member 94 175 - -
Mupr6623g00002 275 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Mupr6623g00002 275 SUPERFAMILY HSP40/DnaJ peptide-binding domain 100 177 IPR008971 GO:0006457|GO:0051082
Mupr6623g00002 275 PRINTS DnaJ domain signature 7 25 IPR001623 -
Mupr6623g00002 275 PRINTS DnaJ domain signature 25 40 IPR001623 -
Mupr6623g00002 275 PRINTS DnaJ domain signature 66 85 IPR001623 -
Mupr6623g00002 275 PRINTS DnaJ domain signature 46 66 IPR001623 -
Mupr6623g00002 275 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 271 - -
Mupr6623g00002 275 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6623g00002 Mupr-Chr6623 1826 3655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6623g00002 6 73 C2H2 Transcription Factor Family AT1G74250 34.783 4.72e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6623g00002 K09510 - gmx:100778440 467.233